Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LIMK2P53671 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LIMK2P53671 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LIMK2P53671 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LIMK2P53671 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LIMK2P53671 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LIMK2P53671 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LIMK2P53671 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LIMK2P53671 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.9■□□□□ 0.14
LIMK2P53671 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC15.9■□□□□ 0.14
LIMK2P53671 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.9■□□□□ 0.14
LIMK2P53671 FAM207CP-201ENST00000443486 507 ntBASIC15.9■□□□□ 0.14
LIMK2P53671 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.9■□□□□ 0.14
LIMK2P53671 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC15.9■□□□□ 0.14
LIMK2P53671 RNA5SP410-201ENST00000516285 106 ntBASIC15.9■□□□□ 0.14
LIMK2P53671 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.9■□□□□ 0.14
LIMK2P53671 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LIMK2P53671 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.9■□□□□ 0.14
LIMK2P53671 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
LIMK2P53671 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LIMK2P53671 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LIMK2P53671 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.9■□□□□ 0.14
LIMK2P53671 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
LIMK2P53671 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LIMK2P53671 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LIMK2P53671 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LIMK2P53671 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.9■□□□□ 0.14
LIMK2P53671 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.9■□□□□ 0.14
LIMK2P53671 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.9■□□□□ 0.14
LIMK2P53671 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.89■□□□□ 0.13
LIMK2P53671 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LIMK2P53671 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LIMK2P53671 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.89■□□□□ 0.13
LIMK2P53671 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
LIMK2P53671 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
LIMK2P53671 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
LIMK2P53671 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
LIMK2P53671 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LIMK2P53671 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.89■□□□□ 0.13
LIMK2P53671 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
LIMK2P53671 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LIMK2P53671 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LIMK2P53671 AC241585.1-201ENST00000433527 519 ntBASIC15.89■□□□□ 0.13
LIMK2P53671 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC15.89■□□□□ 0.13
LIMK2P53671 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
LIMK2P53671 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.89■□□□□ 0.13
LIMK2P53671 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC15.89■□□□□ 0.13
LIMK2P53671 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC15.89■□□□□ 0.13
LIMK2P53671 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC15.89■□□□□ 0.13
LIMK2P53671 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC15.89■□□□□ 0.13
LIMK2P53671 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.89■□□□□ 0.13
LIMK2P53671 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC15.89■□□□□ 0.13
LIMK2P53671 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.89■□□□□ 0.13
LIMK2P53671 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LIMK2P53671 AC003101.2-201ENST00000612557 442 ntBASIC15.89■□□□□ 0.13
LIMK2P53671 AC007967.4-201ENST00000614700 386 ntBASIC15.89■□□□□ 0.13
LIMK2P53671 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
LIMK2P53671 AC073592.8-201ENST00000624126 511 ntBASIC15.89■□□□□ 0.13
LIMK2P53671 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LIMK2P53671 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
LIMK2P53671 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LIMK2P53671 AC099063.4-201ENST00000641099 1602 ntBASIC15.89■□□□□ 0.13
LIMK2P53671 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LIMK2P53671 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LIMK2P53671 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LIMK2P53671 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LIMK2P53671 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LIMK2P53671 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
LIMK2P53671 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LIMK2P53671 AC127383.1-201ENST00000444697 1800 ntBASIC15.89■□□□□ 0.13
LIMK2P53671 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LIMK2P53671 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LIMK2P53671 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LIMK2P53671 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LIMK2P53671 GRAMD4P3-201ENST00000621665 1669 ntBASIC15.89■□□□□ 0.13
LIMK2P53671 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LIMK2P53671 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.89■□□□□ 0.13
LIMK2P53671 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LIMK2P53671 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
LIMK2P53671 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
LIMK2P53671 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LIMK2P53671 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.88■□□□□ 0.13
LIMK2P53671 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.88■□□□□ 0.13
LIMK2P53671 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
LIMK2P53671 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.88■□□□□ 0.13
LIMK2P53671 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
LIMK2P53671 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
LIMK2P53671 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
LIMK2P53671 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
LIMK2P53671 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
LIMK2P53671 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LIMK2P53671 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LIMK2P53671 MIR661-201ENST00000384842 89 ntBASIC15.88■□□□□ 0.13
LIMK2P53671 RAC2-204ENST00000406508 893 ntTSL 5 BASIC15.88■□□□□ 0.13
LIMK2P53671 EEF1DP4-201ENST00000446006 880 ntBASIC15.88■□□□□ 0.13
LIMK2P53671 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.88■□□□□ 0.13
LIMK2P53671 POLD4-211ENST00000539074 714 ntTSL 3 BASIC15.88■□□□□ 0.13
LIMK2P53671 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.88■□□□□ 0.13
LIMK2P53671 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.88■□□□□ 0.13
LIMK2P53671 YTHDF3-AS1-201ENST00000603538 718 ntBASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms