Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.71□□□□□ -0.05
EFNA3P52797 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
EFNA3P52797 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
EFNA3P52797 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
EFNA3P52797 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
EFNA3P52797 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
EFNA3P52797 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.71□□□□□ -0.06
EFNA3P52797 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
EFNA3P52797 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.71□□□□□ -0.06
EFNA3P52797 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.71□□□□□ -0.06
EFNA3P52797 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.71□□□□□ -0.06
EFNA3P52797 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
EFNA3P52797 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
EFNA3P52797 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
EFNA3P52797 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
EFNA3P52797 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
EFNA3P52797 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
EFNA3P52797 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.7□□□□□ -0.06
EFNA3P52797 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC14.7□□□□□ -0.06
EFNA3P52797 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.7□□□□□ -0.06
EFNA3P52797 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
EFNA3P52797 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
EFNA3P52797 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
EFNA3P52797 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
EFNA3P52797 AC063926.2-201ENST00000623766 1308 ntBASIC14.7□□□□□ -0.06
EFNA3P52797 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
EFNA3P52797 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
EFNA3P52797 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
EFNA3P52797 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.7□□□□□ -0.06
EFNA3P52797 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
EFNA3P52797 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
EFNA3P52797 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
EFNA3P52797 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
EFNA3P52797 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
EFNA3P52797 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
EFNA3P52797 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
EFNA3P52797 AP006294.1-201ENST00000415407 339 ntBASIC14.7□□□□□ -0.06
EFNA3P52797 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
EFNA3P52797 U91328.1-201ENST00000437528 223 ntBASIC14.7□□□□□ -0.06
EFNA3P52797 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.7□□□□□ -0.06
EFNA3P52797 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC14.7□□□□□ -0.06
EFNA3P52797 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.7□□□□□ -0.06
EFNA3P52797 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.7□□□□□ -0.06
EFNA3P52797 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.7□□□□□ -0.06
EFNA3P52797 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.7□□□□□ -0.06
EFNA3P52797 BRI3BPP1-201ENST00000594224 787 ntBASIC14.7□□□□□ -0.06
EFNA3P52797 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.7□□□□□ -0.06
EFNA3P52797 AL358472.5-202ENST00000641448 1267 ntBASIC14.7□□□□□ -0.06
EFNA3P52797 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC14.7□□□□□ -0.06
EFNA3P52797 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
EFNA3P52797 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
EFNA3P52797 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
EFNA3P52797 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
EFNA3P52797 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
EFNA3P52797 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
EFNA3P52797 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
EFNA3P52797 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
EFNA3P52797 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
EFNA3P52797 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
EFNA3P52797 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
EFNA3P52797 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
EFNA3P52797 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
EFNA3P52797 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
EFNA3P52797 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
EFNA3P52797 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
EFNA3P52797 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
EFNA3P52797 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
EFNA3P52797 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
EFNA3P52797 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
EFNA3P52797 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
EFNA3P52797 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
EFNA3P52797 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.69□□□□□ -0.06
EFNA3P52797 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
EFNA3P52797 AC098614.1-201ENST00000368528 745 ntBASIC14.69□□□□□ -0.06
EFNA3P52797 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.69□□□□□ -0.06
EFNA3P52797 RN7SL752P-201ENST00000463779 287 ntBASIC14.69□□□□□ -0.06
EFNA3P52797 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.69□□□□□ -0.06
EFNA3P52797 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.69□□□□□ -0.06
EFNA3P52797 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.69□□□□□ -0.06
EFNA3P52797 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC14.69□□□□□ -0.06
EFNA3P52797 AC036164.1-201ENST00000570544 333 ntBASIC14.69□□□□□ -0.06
EFNA3P52797 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.69□□□□□ -0.06
EFNA3P52797 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
EFNA3P52797 AC000095.1-201ENST00000603208 874 ntBASIC14.69□□□□□ -0.06
EFNA3P52797 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
EFNA3P52797 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.69□□□□□ -0.06
EFNA3P52797 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
EFNA3P52797 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
EFNA3P52797 CICP13-201ENST00000422015 2789 ntBASIC14.69□□□□□ -0.06
EFNA3P52797 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.69□□□□□ -0.06
EFNA3P52797 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
EFNA3P52797 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
EFNA3P52797 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
EFNA3P52797 AC092127.1-201ENST00000567093 3455 ntBASIC14.69□□□□□ -0.06
EFNA3P52797 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
EFNA3P52797 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.69□□□□□ -0.06
EFNA3P52797 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
EFNA3P52797 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.69□□□□□ -0.06
EFNA3P52797 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
EFNA3P52797 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms