Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
GPC3P51654 RPSAP52-203ENST00000622976 1023 ntBASIC17.34■□□□□ 0.37
GPC3P51654 AMT-232ENST00000636199 1546 ntTSL 5 BASIC17.34■□□□□ 0.37
GPC3P51654 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC17.34■□□□□ 0.37
GPC3P51654 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GPC3P51654 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GPC3P51654 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GPC3P51654 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.34■□□□□ 0.37
GPC3P51654 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
GPC3P51654 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
GPC3P51654 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
GPC3P51654 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
GPC3P51654 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
GPC3P51654 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC17.33■□□□□ 0.37
GPC3P51654 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
GPC3P51654 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
GPC3P51654 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
GPC3P51654 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
GPC3P51654 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
GPC3P51654 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
GPC3P51654 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
GPC3P51654 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
GPC3P51654 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
GPC3P51654 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
GPC3P51654 ATP5G2P4-201ENST00000442175 420 ntBASIC17.33■□□□□ 0.36
GPC3P51654 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC17.33■□□□□ 0.36
GPC3P51654 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC17.33■□□□□ 0.36
GPC3P51654 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC17.33■□□□□ 0.36
GPC3P51654 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC17.33■□□□□ 0.36
GPC3P51654 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC17.33■□□□□ 0.36
GPC3P51654 CMC2-214ENST00000565925 640 ntTSL 5 BASIC17.33■□□□□ 0.36
GPC3P51654 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
GPC3P51654 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.33■□□□□ 0.36
GPC3P51654 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
GPC3P51654 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.33■□□□□ 0.36
GPC3P51654 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
GPC3P51654 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
GPC3P51654 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC17.32■□□□□ 0.36
GPC3P51654 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC17.32■□□□□ 0.36
GPC3P51654 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
GPC3P51654 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
GPC3P51654 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
GPC3P51654 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GPC3P51654 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
GPC3P51654 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
GPC3P51654 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
GPC3P51654 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.32■□□□□ 0.36
GPC3P51654 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
GPC3P51654 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
GPC3P51654 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC17.32■□□□□ 0.36
GPC3P51654 AC112492.5-201ENST00000421897 457 ntBASIC17.32■□□□□ 0.36
GPC3P51654 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
GPC3P51654 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC17.32■□□□□ 0.36
GPC3P51654 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC17.32■□□□□ 0.36
GPC3P51654 IGHV3-71-201ENST00000523324 359 ntBASIC17.32■□□□□ 0.36
GPC3P51654 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
GPC3P51654 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC17.32■□□□□ 0.36
GPC3P51654 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GPC3P51654 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC17.32■□□□□ 0.36
GPC3P51654 APOC4-201ENST00000591600 348 ntTSL 3 BASIC17.32■□□□□ 0.36
GPC3P51654 AC010319.3-201ENST00000597028 470 ntBASIC17.32■□□□□ 0.36
GPC3P51654 AL359881.2-201ENST00000602973 570 ntBASIC17.32■□□□□ 0.36
GPC3P51654 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC17.32■□□□□ 0.36
GPC3P51654 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
GPC3P51654 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
GPC3P51654 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GPC3P51654 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
GPC3P51654 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GPC3P51654 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
GPC3P51654 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.32■□□□□ 0.36
GPC3P51654 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC17.32■□□□□ 0.36
GPC3P51654 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GPC3P51654 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
GPC3P51654 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
GPC3P51654 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
GPC3P51654 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
GPC3P51654 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
GPC3P51654 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.32■□□□□ 0.36
GPC3P51654 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC17.32■□□□□ 0.36
GPC3P51654 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
GPC3P51654 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
GPC3P51654 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
GPC3P51654 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GPC3P51654 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
GPC3P51654 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
GPC3P51654 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC17.31■□□□□ 0.36
GPC3P51654 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC17.31■□□□□ 0.36
GPC3P51654 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.31■□□□□ 0.36
GPC3P51654 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
GPC3P51654 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GPC3P51654 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GPC3P51654 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
GPC3P51654 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
GPC3P51654 RAC2-202ENST00000401529 569 ntTSL 4 BASIC17.31■□□□□ 0.36
GPC3P51654 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC17.31■□□□□ 0.36
GPC3P51654 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC17.31■□□□□ 0.36
GPC3P51654 ACA64.2-201ENST00000459014 129 ntBASIC17.31■□□□□ 0.36
GPC3P51654 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC17.31■□□□□ 0.36
GPC3P51654 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC17.31■□□□□ 0.36
GPC3P51654 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms