Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
TUBP50607 GRAP-202ENST00000395635 834 ntTSL 2 BASIC16.62■□□□□ 0.25
TUBP50607 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.62■□□□□ 0.25
TUBP50607 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC16.62■□□□□ 0.25
TUBP50607 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.62■□□□□ 0.25
TUBP50607 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC16.62■□□□□ 0.25
TUBP50607 AP005018.1-201ENST00000525475 301 ntBASIC16.62■□□□□ 0.25
TUBP50607 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.62■□□□□ 0.25
TUBP50607 TIMM17BP1-201ENST00000545713 516 ntBASIC16.62■□□□□ 0.25
TUBP50607 RRP7BP-205ENST00000566851 833 ntBASIC16.62■□□□□ 0.25
TUBP50607 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.62■□□□□ 0.25
TUBP50607 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.62■□□□□ 0.25
TUBP50607 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TUBP50607 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TUBP50607 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TUBP50607 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.62■□□□□ 0.25
TUBP50607 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TUBP50607 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.62■□□□□ 0.25
TUBP50607 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TUBP50607 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.62■□□□□ 0.25
TUBP50607 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.62■□□□□ 0.25
TUBP50607 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.62■□□□□ 0.25
TUBP50607 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.62■□□□□ 0.25
TUBP50607 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TUBP50607 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
TUBP50607 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TUBP50607 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TUBP50607 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TUBP50607 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
TUBP50607 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TUBP50607 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TUBP50607 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TUBP50607 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TUBP50607 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TUBP50607 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TUBP50607 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TUBP50607 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TUBP50607 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TUBP50607 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.61■□□□□ 0.25
TUBP50607 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC16.61■□□□□ 0.25
TUBP50607 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
TUBP50607 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.61■□□□□ 0.25
TUBP50607 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.61■□□□□ 0.25
TUBP50607 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TUBP50607 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.61■□□□□ 0.25
TUBP50607 EDF1-203ENST00000371649 790 ntTSL 2 BASIC16.61■□□□□ 0.25
TUBP50607 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TUBP50607 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TUBP50607 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TUBP50607 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.61■□□□□ 0.25
TUBP50607 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16.61■□□□□ 0.25
TUBP50607 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.61■□□□□ 0.25
TUBP50607 TPRX2P-201ENST00000535362 881 ntBASIC16.61■□□□□ 0.25
TUBP50607 CR383656.12-201ENST00000549567 513 ntBASIC16.61■□□□□ 0.25
TUBP50607 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.61■□□□□ 0.25
TUBP50607 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC16.61■□□□□ 0.25
TUBP50607 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
TUBP50607 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.61■□□□□ 0.25
TUBP50607 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
TUBP50607 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16.61■□□□□ 0.25
TUBP50607 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.61■□□□□ 0.25
TUBP50607 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.61■□□□□ 0.25
TUBP50607 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TUBP50607 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TUBP50607 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TUBP50607 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.61■□□□□ 0.25
TUBP50607 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TUBP50607 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TUBP50607 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TUBP50607 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TUBP50607 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TUBP50607 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.61■□□□□ 0.25
TUBP50607 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TUBP50607 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.61■□□□□ 0.25
TUBP50607 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
TUBP50607 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
TUBP50607 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.6■□□□□ 0.25
TUBP50607 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TUBP50607 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TUBP50607 AC134407.2-201ENST00000625089 1978 ntBASIC16.6■□□□□ 0.25
TUBP50607 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
TUBP50607 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TUBP50607 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
TUBP50607 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.6■□□□□ 0.25
TUBP50607 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
TUBP50607 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TUBP50607 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.6■□□□□ 0.25
TUBP50607 RPL13P2-201ENST00000440687 659 ntBASIC16.6■□□□□ 0.25
TUBP50607 GAPDHP21-201ENST00000450301 1010 ntBASIC16.6■□□□□ 0.25
TUBP50607 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.6■□□□□ 0.25
TUBP50607 MEIS3P1-201ENST00000495167 958 ntBASIC16.6■□□□□ 0.25
TUBP50607 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.6■□□□□ 0.25
TUBP50607 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.6■□□□□ 0.25
TUBP50607 RBM7-207ENST00000544582 692 ntTSL 3 BASIC16.6■□□□□ 0.25
TUBP50607 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
TUBP50607 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.6■□□□□ 0.25
TUBP50607 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
TUBP50607 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC16.6■□□□□ 0.25
TUBP50607 AL596325.1-201ENST00000563991 1082 ntBASIC16.6■□□□□ 0.25
TUBP50607 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms