Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
UBE2AP49459 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC10.08□□□□□ -0.8
UBE2AP49459 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC10.08□□□□□ -0.8
UBE2AP49459 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
UBE2AP49459 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
UBE2AP49459 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
UBE2AP49459 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC10.08□□□□□ -0.8
UBE2AP49459 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC10.08□□□□□ -0.8
UBE2AP49459 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC10.08□□□□□ -0.8
UBE2AP49459 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC10.08□□□□□ -0.8
UBE2AP49459 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
UBE2AP49459 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC10.08□□□□□ -0.8
UBE2AP49459 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
UBE2AP49459 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
UBE2AP49459 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
UBE2AP49459 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
UBE2AP49459 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
UBE2AP49459 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
UBE2AP49459 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
UBE2AP49459 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
UBE2AP49459 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
UBE2AP49459 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
UBE2AP49459 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
UBE2AP49459 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
UBE2AP49459 LINC02447-202ENST00000501888 2146 ntBASIC10.07□□□□□ -0.8
UBE2AP49459 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
UBE2AP49459 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC10.07□□□□□ -0.8
UBE2AP49459 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
UBE2AP49459 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
UBE2AP49459 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
UBE2AP49459 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
UBE2AP49459 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC10.07□□□□□ -0.8
UBE2AP49459 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
UBE2AP49459 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
UBE2AP49459 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
UBE2AP49459 MAML3-203ENST00000509479 6844 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
UBE2AP49459 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
UBE2AP49459 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC10.07□□□□□ -0.8
UBE2AP49459 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC10.07□□□□□ -0.8
UBE2AP49459 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
UBE2AP49459 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC10.07□□□□□ -0.8
UBE2AP49459 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC10.07□□□□□ -0.8
UBE2AP49459 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
UBE2AP49459 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC10.07□□□□□ -0.8
UBE2AP49459 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
UBE2AP49459 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
UBE2AP49459 AC092474.2-201ENST00000424288 719 ntBASIC10.07□□□□□ -0.8
UBE2AP49459 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC10.07□□□□□ -0.8
UBE2AP49459 AC093724.1-201ENST00000448659 1027 ntBASIC10.07□□□□□ -0.8
UBE2AP49459 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC10.07□□□□□ -0.8
UBE2AP49459 PDPK2P-202ENST00000562415 1191 ntBASIC10.07□□□□□ -0.8
UBE2AP49459 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC10.07□□□□□ -0.8
UBE2AP49459 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
UBE2AP49459 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC10.07□□□□□ -0.8
UBE2AP49459 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
UBE2AP49459 ABR-202ENST00000302538 5289 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
UBE2AP49459 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
UBE2AP49459 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC10.07□□□□□ -0.8
UBE2AP49459 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
UBE2AP49459 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC10.07□□□□□ -0.8
UBE2AP49459 AL603832.2-201ENST00000566195 2125 ntBASIC10.07□□□□□ -0.8
UBE2AP49459 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
UBE2AP49459 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
UBE2AP49459 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC10.07□□□□□ -0.8
UBE2AP49459 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
UBE2AP49459 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
UBE2AP49459 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC10.07□□□□□ -0.8
UBE2AP49459 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC10.07□□□□□ -0.8
UBE2AP49459 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
UBE2AP49459 AC010491.1-201ENST00000563101 2797 ntBASIC10.07□□□□□ -0.8
UBE2AP49459 FLNA-204ENST00000369856 8241 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
UBE2AP49459 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC10.07□□□□□ -0.8
UBE2AP49459 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
UBE2AP49459 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
UBE2AP49459 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
UBE2AP49459 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
UBE2AP49459 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
UBE2AP49459 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
UBE2AP49459 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
UBE2AP49459 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
UBE2AP49459 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC10.06□□□□□ -0.8
UBE2AP49459 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC10.06□□□□□ -0.8
UBE2AP49459 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
UBE2AP49459 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC10.06□□□□□ -0.8
UBE2AP49459 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
UBE2AP49459 VILL-207ENST00000465644 1857 ntTSL 5 BASIC10.06□□□□□ -0.8
UBE2AP49459 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
UBE2AP49459 FAM157A-203ENST00000634862 6083 ntTSL 5 BASIC10.06□□□□□ -0.8
UBE2AP49459 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
UBE2AP49459 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
UBE2AP49459 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
UBE2AP49459 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC10.06□□□□□ -0.8
UBE2AP49459 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC10.06□□□□□ -0.8
UBE2AP49459 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
UBE2AP49459 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
UBE2AP49459 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
UBE2AP49459 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
UBE2AP49459 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
UBE2AP49459 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
UBE2AP49459 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC10.06□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms