Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
PCP4P48539 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
PCP4P48539 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
PCP4P48539 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
PCP4P48539 TCF4-202ENST00000356073 8317 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
PCP4P48539 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
PCP4P48539 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
PCP4P48539 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
PCP4P48539 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC10.48□□□□□ -0.73
PCP4P48539 KRT42P-201ENST00000398469 2864 ntTSL 2 BASIC10.48□□□□□ -0.73
PCP4P48539 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
PCP4P48539 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
PCP4P48539 KPNA3-201ENST00000261667 4474 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
PCP4P48539 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
PCP4P48539 AL445531.1-201ENST00000562653 1728 ntBASIC10.47□□□□□ -0.73
PCP4P48539 ZNF189-203ENST00000374861 3134 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
PCP4P48539 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
PCP4P48539 ABL2-207ENST00000507173 3177 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
PCP4P48539 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
PCP4P48539 NMNAT2-202ENST00000294868 5448 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
PCP4P48539 SDCCAG8-201ENST00000366541 2567 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
PCP4P48539 SLC28A1-201ENST00000286749 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
PCP4P48539 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
PCP4P48539 SYTL2-206ENST00000389960 4299 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
PCP4P48539 CIZ1-201ENST00000277465 2742 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
PCP4P48539 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
PCP4P48539 MAMDC2-201ENST00000377182 3616 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
PCP4P48539 KCNJ11-201ENST00000339994 2801 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
PCP4P48539 TMEFF2-202ENST00000392314 2842 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
PCP4P48539 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
PCP4P48539 SRC-204ENST00000373578 4630 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
PCP4P48539 PSAPL1-201ENST00000319098 4680 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
PCP4P48539 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
PCP4P48539 SSSCA1-AS1-201ENST00000567594 614 ntBASIC10.47□□□□□ -0.73
PCP4P48539 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC10.47□□□□□ -0.73
PCP4P48539 VPS18-201ENST00000220509 3895 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
PCP4P48539 HAUS6-202ENST00000380502 6536 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
PCP4P48539 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
PCP4P48539 TNPO2-210ENST00000588216 3056 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
PCP4P48539 TP53-208ENST00000504290 2331 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
PCP4P48539 TP53-220ENST00000610623 2331 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
PCP4P48539 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
PCP4P48539 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC10.47□□□□□ -0.73
PCP4P48539 ZNF589-201ENST00000354698 3368 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
PCP4P48539 USP4-203ENST00000415188 1454 ntTSL 3 BASIC10.47□□□□□ -0.73
PCP4P48539 RGS6-203ENST00000402788 5400 ntTSL 2 BASIC10.47□□□□□ -0.73
PCP4P48539 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC10.47□□□□□ -0.73
PCP4P48539 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
PCP4P48539 BCL6-202ENST00000406870 3569 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
PCP4P48539 DDR1-232ENST00000418800 3588 ntAPPRIS P3 TSL 2 BASIC10.47□□□□□ -0.73
PCP4P48539 CHMP2B-201ENST00000263780 2557 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
PCP4P48539 SLC27A6-202ENST00000395266 2616 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
PCP4P48539 ZNF226-204ENST00000454662 2605 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
PCP4P48539 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC10.47□□□□□ -0.73
PCP4P48539 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
PCP4P48539 GPR12-202ENST00000405846 4850 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
PCP4P48539 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
PCP4P48539 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC10.47□□□□□ -0.73
PCP4P48539 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
PCP4P48539 INSC-201ENST00000379554 2954 ntAPPRIS P4 TSL 1 (best) BASIC10.47□□□□□ -0.73
PCP4P48539 NBPF1-204ENST00000432949 4176 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
PCP4P48539 EBF2-201ENST00000408929 1888 ntTSL 2 BASIC10.47□□□□□ -0.73
PCP4P48539 GPR158-201ENST00000376351 6959 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
PCP4P48539 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC10.46□□□□□ -0.73
PCP4P48539 AC112693.3-201ENST00000624819 1983 ntBASIC10.46□□□□□ -0.73
PCP4P48539 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC10.46□□□□□ -0.73
PCP4P48539 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC10.46□□□□□ -0.73
PCP4P48539 AC008158.1-201ENST00000578759 3668 ntBASIC10.46□□□□□ -0.73
PCP4P48539 NCL-201ENST00000322723 4034 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.73
PCP4P48539 MASP1-201ENST00000169293 2440 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
PCP4P48539 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
PCP4P48539 CENPO-206ENST00000473706 4272 ntTSL 2 BASIC10.46□□□□□ -0.73
PCP4P48539 CACUL1-201ENST00000369151 11311 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
PCP4P48539 DDX27-207ENST00000622530 2693 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
PCP4P48539 EIF5B-205ENST00000617677 4698 ntAPPRIS ALT1 TSL 5 BASIC10.46□□□□□ -0.73
PCP4P48539 CCDC144CP-201ENST00000340196 2823 ntTSL 2 BASIC10.46□□□□□ -0.73
PCP4P48539 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
PCP4P48539 SLX4-201ENST00000294008 7307 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
PCP4P48539 CACNA2D4-219ENST00000585708 3273 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
PCP4P48539 TMEM164-204ENST00000372073 5567 ntAPPRIS P3 TSL 5 BASIC10.46□□□□□ -0.73
PCP4P48539 SLC45A4-201ENST00000024061 3546 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
PCP4P48539 SYPL2-201ENST00000369872 3624 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
PCP4P48539 LRTM2-201ENST00000299194 3688 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.73
PCP4P48539 AP005435.1-201ENST00000529293 1178 ntBASIC10.46□□□□□ -0.73
PCP4P48539 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
PCP4P48539 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
PCP4P48539 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC10.46□□□□□ -0.74
PCP4P48539 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
PCP4P48539 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
PCP4P48539 GMCL1P1-201ENST00000463439 1581 ntBASIC10.46□□□□□ -0.74
PCP4P48539 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
PCP4P48539 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
PCP4P48539 RBM12-202ENST00000374104 5213 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
PCP4P48539 NDRG2-201ENST00000298684 1784 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
PCP4P48539 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC10.46□□□□□ -0.74
PCP4P48539 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
PCP4P48539 SP100-208ENST00000427101 1922 ntTSL 2 BASIC10.46□□□□□ -0.74
PCP4P48539 REXO1L11P-201ENST00000620964 1927 ntBASIC10.46□□□□□ -0.74
PCP4P48539 C1QTNF3-201ENST00000231338 1959 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
PCP4P48539 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC10.46□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms