Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RFC5P40937 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
RFC5P40937 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC17.33■□□□□ 0.37
RFC5P40937 ILF3-AS1-201ENST00000591501 1983 ntBASIC17.33■□□□□ 0.37
RFC5P40937 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.33■□□□□ 0.37
RFC5P40937 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
RFC5P40937 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RFC5P40937 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC17.33■□□□□ 0.37
RFC5P40937 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RFC5P40937 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC17.33■□□□□ 0.37
RFC5P40937 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RFC5P40937 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RFC5P40937 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RFC5P40937 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RFC5P40937 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
RFC5P40937 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
RFC5P40937 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC17.33■□□□□ 0.36
RFC5P40937 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
RFC5P40937 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RFC5P40937 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC17.33■□□□□ 0.36
RFC5P40937 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RFC5P40937 AL512384.1-201ENST00000406683 331 ntBASIC17.33■□□□□ 0.36
RFC5P40937 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RFC5P40937 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC17.33■□□□□ 0.36
RFC5P40937 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RFC5P40937 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC17.33■□□□□ 0.36
RFC5P40937 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC17.33■□□□□ 0.36
RFC5P40937 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RFC5P40937 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC17.33■□□□□ 0.36
RFC5P40937 AC124312.2-201ENST00000546615 427 ntTSL 3 BASIC17.33■□□□□ 0.36
RFC5P40937 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC17.33■□□□□ 0.36
RFC5P40937 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC17.33■□□□□ 0.36
RFC5P40937 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RFC5P40937 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC17.33■□□□□ 0.36
RFC5P40937 AC133539.2-201ENST00000604757 467 ntBASIC17.33■□□□□ 0.36
RFC5P40937 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
RFC5P40937 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC17.33■□□□□ 0.36
RFC5P40937 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
RFC5P40937 AL033527.5-201ENST00000641382 801 ntBASIC17.33■□□□□ 0.36
RFC5P40937 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RFC5P40937 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.33■□□□□ 0.36
RFC5P40937 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RFC5P40937 INTS4P2-202ENST00000614726 2019 ntBASIC17.33■□□□□ 0.36
RFC5P40937 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RFC5P40937 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RFC5P40937 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
RFC5P40937 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RFC5P40937 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC17.33■□□□□ 0.36
RFC5P40937 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RFC5P40937 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.33■□□□□ 0.36
RFC5P40937 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
RFC5P40937 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
RFC5P40937 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.32■□□□□ 0.36
RFC5P40937 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC17.32■□□□□ 0.36
RFC5P40937 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
RFC5P40937 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC17.32■□□□□ 0.36
RFC5P40937 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RFC5P40937 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.32■□□□□ 0.36
RFC5P40937 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RFC5P40937 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC17.32■□□□□ 0.36
RFC5P40937 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RFC5P40937 HNRNPA1P48-201ENST00000562726 1377 ntBASIC17.32■□□□□ 0.36
RFC5P40937 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RFC5P40937 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RFC5P40937 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RFC5P40937 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RFC5P40937 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
RFC5P40937 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC17.32■□□□□ 0.36
RFC5P40937 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC17.32■□□□□ 0.36
RFC5P40937 AC134915.1-201ENST00000426461 574 ntBASIC17.32■□□□□ 0.36
RFC5P40937 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
RFC5P40937 GPX4-206ENST00000588919 803 ntTSL 2 BASIC17.32■□□□□ 0.36
RFC5P40937 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC17.32■□□□□ 0.36
RFC5P40937 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC17.32■□□□□ 0.36
RFC5P40937 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
RFC5P40937 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC17.32■□□□□ 0.36
RFC5P40937 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
RFC5P40937 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC17.32■□□□□ 0.36
RFC5P40937 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RFC5P40937 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RFC5P40937 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RFC5P40937 LOX-206ENST00000639739 1626 ntTSL 5 BASIC17.32■□□□□ 0.36
RFC5P40937 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RFC5P40937 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
RFC5P40937 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
RFC5P40937 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
RFC5P40937 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
RFC5P40937 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.32■□□□□ 0.36
RFC5P40937 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.31■□□□□ 0.36
RFC5P40937 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
RFC5P40937 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RFC5P40937 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC17.31■□□□□ 0.36
RFC5P40937 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RFC5P40937 AP005117.1-202ENST00000581724 1908 ntBASIC17.31■□□□□ 0.36
RFC5P40937 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RFC5P40937 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC17.31■□□□□ 0.36
RFC5P40937 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RFC5P40937 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC17.31■□□□□ 0.36
RFC5P40937 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RFC5P40937 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms