Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
HMGCLP35914 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
HMGCLP35914 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HMGCLP35914 AL158212.4-201ENST00000624062 1286 ntBASIC15.64■□□□□ 0.09
HMGCLP35914 AC022532.1-201ENST00000624563 1728 ntBASIC15.64■□□□□ 0.09
HMGCLP35914 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HMGCLP35914 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HMGCLP35914 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HMGCLP35914 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.64■□□□□ 0.09
HMGCLP35914 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
HMGCLP35914 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.64■□□□□ 0.09
HMGCLP35914 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
HMGCLP35914 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HMGCLP35914 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HMGCLP35914 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.64■□□□□ 0.09
HMGCLP35914 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
HMGCLP35914 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HMGCLP35914 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.64■□□□□ 0.09
HMGCLP35914 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HMGCLP35914 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HMGCLP35914 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.63■□□□□ 0.09
HMGCLP35914 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
HMGCLP35914 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HMGCLP35914 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HMGCLP35914 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HMGCLP35914 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
HMGCLP35914 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
HMGCLP35914 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HMGCLP35914 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
HMGCLP35914 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.63■□□□□ 0.09
HMGCLP35914 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HMGCLP35914 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HMGCLP35914 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HMGCLP35914 AC084364.1-201ENST00000551967 1556 ntBASIC15.63■□□□□ 0.09
HMGCLP35914 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.63■□□□□ 0.09
HMGCLP35914 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
HMGCLP35914 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HMGCLP35914 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.63■□□□□ 0.09
HMGCLP35914 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
HMGCLP35914 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HMGCLP35914 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HMGCLP35914 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HMGCLP35914 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HMGCLP35914 SPDYE19P-201ENST00000338590 713 ntBASIC15.63■□□□□ 0.09
HMGCLP35914 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HMGCLP35914 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HMGCLP35914 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.63■□□□□ 0.09
HMGCLP35914 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HMGCLP35914 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HMGCLP35914 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.63■□□□□ 0.09
HMGCLP35914 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.63■□□□□ 0.09
HMGCLP35914 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HMGCLP35914 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HMGCLP35914 SERBP1P5-201ENST00000510079 1181 ntBASIC15.63■□□□□ 0.09
HMGCLP35914 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC15.63■□□□□ 0.09
HMGCLP35914 RARRES2P5-201ENST00000564013 466 ntBASIC15.63■□□□□ 0.09
HMGCLP35914 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
HMGCLP35914 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15.63■□□□□ 0.09
HMGCLP35914 AC000095.1-201ENST00000603208 874 ntBASIC15.63■□□□□ 0.09
HMGCLP35914 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.63■□□□□ 0.09
HMGCLP35914 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.63■□□□□ 0.09
HMGCLP35914 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HMGCLP35914 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HMGCLP35914 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.63■□□□□ 0.09
HMGCLP35914 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HMGCLP35914 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
HMGCLP35914 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HMGCLP35914 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.63■□□□□ 0.09
HMGCLP35914 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
HMGCLP35914 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.63■□□□□ 0.09
HMGCLP35914 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
HMGCLP35914 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HMGCLP35914 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.62■□□□□ 0.09
HMGCLP35914 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.62■□□□□ 0.09
HMGCLP35914 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HMGCLP35914 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.62■□□□□ 0.09
HMGCLP35914 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HMGCLP35914 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
HMGCLP35914 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HMGCLP35914 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
HMGCLP35914 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
HMGCLP35914 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
HMGCLP35914 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
HMGCLP35914 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.62■□□□□ 0.09
HMGCLP35914 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.62■□□□□ 0.09
HMGCLP35914 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
HMGCLP35914 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HMGCLP35914 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HMGCLP35914 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
HMGCLP35914 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HMGCLP35914 MIR661-201ENST00000384842 89 ntBASIC15.62■□□□□ 0.09
HMGCLP35914 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HMGCLP35914 RPL5P21-201ENST00000404620 815 ntBASIC15.62■□□□□ 0.09
HMGCLP35914 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC15.62■□□□□ 0.09
HMGCLP35914 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.62■□□□□ 0.09
HMGCLP35914 AC093004.1-201ENST00000508850 424 ntBASIC15.62■□□□□ 0.09
HMGCLP35914 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC15.62■□□□□ 0.09
HMGCLP35914 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC15.62■□□□□ 0.09
HMGCLP35914 TPRX2P-201ENST00000535362 881 ntBASIC15.62■□□□□ 0.09
HMGCLP35914 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms