Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLCN1P35523 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC18■□□□□ 0.47
CLCN1P35523 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CLCN1P35523 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLCN1P35523 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC17.99■□□□□ 0.47
CLCN1P35523 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC17.99■□□□□ 0.47
CLCN1P35523 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.99■□□□□ 0.47
CLCN1P35523 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CLCN1P35523 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
CLCN1P35523 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CLCN1P35523 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLCN1P35523 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLCN1P35523 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC17.99■□□□□ 0.47
CLCN1P35523 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLCN1P35523 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC17.99■□□□□ 0.47
CLCN1P35523 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLCN1P35523 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC17.99■□□□□ 0.47
CLCN1P35523 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC17.99■□□□□ 0.47
CLCN1P35523 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLCN1P35523 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CLCN1P35523 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLCN1P35523 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLCN1P35523 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.99■□□□□ 0.47
CLCN1P35523 AL031284.1-201ENST00000419297 478 ntBASIC17.99■□□□□ 0.47
CLCN1P35523 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CLCN1P35523 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.99■□□□□ 0.47
CLCN1P35523 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.99■□□□□ 0.47
CLCN1P35523 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.99■□□□□ 0.47
CLCN1P35523 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.99■□□□□ 0.47
CLCN1P35523 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.99■□□□□ 0.47
CLCN1P35523 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CLCN1P35523 AC117500.6-201ENST00000624871 588 ntBASIC17.99■□□□□ 0.47
CLCN1P35523 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CLCN1P35523 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLCN1P35523 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLCN1P35523 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLCN1P35523 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CLCN1P35523 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CLCN1P35523 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLCN1P35523 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.99■□□□□ 0.47
CLCN1P35523 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CLCN1P35523 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CLCN1P35523 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CLCN1P35523 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.99■□□□□ 0.47
CLCN1P35523 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLCN1P35523 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CLCN1P35523 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CLCN1P35523 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLCN1P35523 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
CLCN1P35523 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLCN1P35523 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CLCN1P35523 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CLCN1P35523 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLCN1P35523 AC131009.4-201ENST00000624048 1740 ntBASIC17.98■□□□□ 0.47
CLCN1P35523 LINC01144-201ENST00000626198 1710 ntBASIC17.98■□□□□ 0.47
CLCN1P35523 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC17.98■□□□□ 0.47
CLCN1P35523 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC17.98■□□□□ 0.47
CLCN1P35523 AC005562.1-201ENST00000583030 3219 ntBASIC17.98■□□□□ 0.47
CLCN1P35523 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLCN1P35523 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.98■□□□□ 0.47
CLCN1P35523 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
CLCN1P35523 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
CLCN1P35523 AC092910.1-201ENST00000482027 1129 ntBASIC17.98■□□□□ 0.47
CLCN1P35523 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.98■□□□□ 0.47
CLCN1P35523 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.98■□□□□ 0.47
CLCN1P35523 AC004790.2-201ENST00000623588 572 ntBASIC17.98■□□□□ 0.47
CLCN1P35523 HADH-212ENST00000638621 741 ntTSL 5 BASIC17.98■□□□□ 0.47
CLCN1P35523 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
CLCN1P35523 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.98■□□□□ 0.47
CLCN1P35523 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLCN1P35523 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLCN1P35523 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLCN1P35523 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLCN1P35523 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CLCN1P35523 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLCN1P35523 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
CLCN1P35523 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLCN1P35523 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC17.98■□□□□ 0.47
CLCN1P35523 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
CLCN1P35523 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLCN1P35523 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
CLCN1P35523 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLCN1P35523 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLCN1P35523 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CLCN1P35523 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLCN1P35523 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CLCN1P35523 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC17.97■□□□□ 0.47
CLCN1P35523 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC17.97■□□□□ 0.47
CLCN1P35523 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CLCN1P35523 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC17.97■□□□□ 0.47
CLCN1P35523 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLCN1P35523 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.97■□□□□ 0.47
CLCN1P35523 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.97■□□□□ 0.47
CLCN1P35523 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CLCN1P35523 AC108073.2-201ENST00000464002 357 ntBASIC17.97■□□□□ 0.47
CLCN1P35523 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.97■□□□□ 0.47
CLCN1P35523 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CLCN1P35523 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.97■□□□□ 0.47
CLCN1P35523 SLC25A6P4-201ENST00000586535 553 ntBASIC17.97■□□□□ 0.47
CLCN1P35523 AC005593.1-201ENST00000624894 515 ntBASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms