Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
USP6P35125 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
USP6P35125 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
USP6P35125 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC20.86■□□□□ 0.93
USP6P35125 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
USP6P35125 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
USP6P35125 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
USP6P35125 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC20.86■□□□□ 0.93
USP6P35125 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
USP6P35125 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
USP6P35125 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
USP6P35125 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
USP6P35125 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC20.86■□□□□ 0.93
USP6P35125 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC20.86■□□□□ 0.93
USP6P35125 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
USP6P35125 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC20.86■□□□□ 0.93
USP6P35125 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
USP6P35125 SUPT20HL2-201ENST00000486479 2409 ntBASIC20.86■□□□□ 0.93
USP6P35125 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
USP6P35125 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC20.86■□□□□ 0.93
USP6P35125 SMS-201ENST00000379404 1174 ntTSL 3 BASIC20.86■□□□□ 0.93
USP6P35125 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC20.86■□□□□ 0.93
USP6P35125 AC092506.1-202ENST00000401022 528 ntBASIC20.86■□□□□ 0.93
USP6P35125 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
USP6P35125 CHMP1AP1-201ENST00000445563 662 ntBASIC20.86■□□□□ 0.93
USP6P35125 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
USP6P35125 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC20.86■□□□□ 0.93
USP6P35125 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC20.86■□□□□ 0.93
USP6P35125 CHMP4BP1-201ENST00000556017 588 ntBASIC20.86■□□□□ 0.93
USP6P35125 DUX4L47-201ENST00000566374 394 ntBASIC20.86■□□□□ 0.93
USP6P35125 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC20.86■□□□□ 0.93
USP6P35125 AC004466.1-201ENST00000599515 1080 ntBASIC20.86■□□□□ 0.93
USP6P35125 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC20.86■□□□□ 0.93
USP6P35125 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
USP6P35125 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC20.86■□□□□ 0.93
USP6P35125 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
USP6P35125 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
USP6P35125 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
USP6P35125 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
USP6P35125 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC20.85■□□□□ 0.93
USP6P35125 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
USP6P35125 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
USP6P35125 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
USP6P35125 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC20.85■□□□□ 0.93
USP6P35125 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
USP6P35125 PCDH8P1-201ENST00000428983 2773 ntBASIC20.85■□□□□ 0.93
USP6P35125 CYP2T1P-202ENST00000641596 2535 ntBASIC20.85■□□□□ 0.93
USP6P35125 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
USP6P35125 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC20.85■□□□□ 0.93
USP6P35125 AC009090.5-201ENST00000624886 2285 ntBASIC20.85■□□□□ 0.93
USP6P35125 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC20.85■□□□□ 0.93
USP6P35125 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC20.85■□□□□ 0.93
USP6P35125 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
USP6P35125 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
USP6P35125 DEF8-202ENST00000418391 852 ntTSL 2 BASIC20.85■□□□□ 0.93
USP6P35125 AL354877.1-201ENST00000424412 413 ntBASIC20.85■□□□□ 0.93
USP6P35125 AC016700.1-201ENST00000429424 312 ntBASIC20.85■□□□□ 0.93
USP6P35125 FNTAP2-201ENST00000430308 634 ntBASIC20.85■□□□□ 0.93
USP6P35125 TSACC-208ENST00000481479 741 ntTSL 2 BASIC20.85■□□□□ 0.93
USP6P35125 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC20.85■□□□□ 0.93
USP6P35125 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC20.85■□□□□ 0.93
USP6P35125 AC022616.1-201ENST00000518688 554 ntBASIC20.85■□□□□ 0.93
USP6P35125 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC20.85■□□□□ 0.93
USP6P35125 RETN-203ENST00000629642 400 ntTSL 5 BASIC20.85■□□□□ 0.93
USP6P35125 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
USP6P35125 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC20.85■□□□□ 0.93
USP6P35125 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC20.85■□□□□ 0.93
USP6P35125 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
USP6P35125 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
USP6P35125 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
USP6P35125 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
USP6P35125 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
USP6P35125 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
USP6P35125 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
USP6P35125 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
USP6P35125 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
USP6P35125 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
USP6P35125 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC20.84■□□□□ 0.93
USP6P35125 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC20.84■□□□□ 0.93
USP6P35125 AC044849.1-201ENST00000519737 1188 ntBASIC20.84■□□□□ 0.93
USP6P35125 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC20.84■□□□□ 0.93
USP6P35125 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC20.84■□□□□ 0.93
USP6P35125 AP001002.3-201ENST00000623482 206 ntBASIC20.84■□□□□ 0.93
USP6P35125 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
USP6P35125 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC20.84■□□□□ 0.93
USP6P35125 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
USP6P35125 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC20.83■□□□□ 0.93
USP6P35125 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
USP6P35125 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
USP6P35125 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
USP6P35125 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC20.83■□□□□ 0.93
USP6P35125 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
USP6P35125 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
USP6P35125 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC20.83■□□□□ 0.93
USP6P35125 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
USP6P35125 HNRNPA1P63-201ENST00000427917 963 ntBASIC20.83■□□□□ 0.93
USP6P35125 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC20.83■□□□□ 0.93
USP6P35125 SERPINA13P-202ENST00000478994 924 ntBASIC20.83■□□□□ 0.93
USP6P35125 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC20.83■□□□□ 0.93
USP6P35125 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms