Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.52□□□□□ -0.09
ABCD3P28288 AL589987.1-201ENST00000453380 819 ntBASIC14.52□□□□□ -0.09
ABCD3P28288 OARD1-208ENST00000469104 704 ntTSL 2 BASIC14.52□□□□□ -0.09
ABCD3P28288 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.52□□□□□ -0.09
ABCD3P28288 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.52□□□□□ -0.09
ABCD3P28288 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.52□□□□□ -0.09
ABCD3P28288 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
ABCD3P28288 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
ABCD3P28288 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
ABCD3P28288 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.52□□□□□ -0.09
ABCD3P28288 AC004790.1-201ENST00000612686 536 ntBASIC14.52□□□□□ -0.09
ABCD3P28288 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC14.52□□□□□ -0.09
ABCD3P28288 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
ABCD3P28288 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.52□□□□□ -0.09
ABCD3P28288 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ABCD3P28288 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
ABCD3P28288 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.52□□□□□ -0.09
ABCD3P28288 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ABCD3P28288 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ABCD3P28288 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ABCD3P28288 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
ABCD3P28288 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
ABCD3P28288 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
ABCD3P28288 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
ABCD3P28288 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
ABCD3P28288 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
ABCD3P28288 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
ABCD3P28288 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.52□□□□□ -0.09
ABCD3P28288 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
ABCD3P28288 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ABCD3P28288 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
ABCD3P28288 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
ABCD3P28288 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ABCD3P28288 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.51□□□□□ -0.09
ABCD3P28288 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ABCD3P28288 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ABCD3P28288 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
ABCD3P28288 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.51□□□□□ -0.09
ABCD3P28288 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
ABCD3P28288 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ABCD3P28288 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.51□□□□□ -0.09
ABCD3P28288 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.51□□□□□ -0.09
ABCD3P28288 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
ABCD3P28288 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
ABCD3P28288 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.51□□□□□ -0.09
ABCD3P28288 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ABCD3P28288 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.51□□□□□ -0.09
ABCD3P28288 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ABCD3P28288 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ABCD3P28288 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ABCD3P28288 SPDYE19P-201ENST00000338590 713 ntBASIC14.51□□□□□ -0.09
ABCD3P28288 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
ABCD3P28288 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.51□□□□□ -0.09
ABCD3P28288 TOMM22P5-201ENST00000416399 439 ntBASIC14.51□□□□□ -0.09
ABCD3P28288 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.51□□□□□ -0.09
ABCD3P28288 GNAQP1-201ENST00000444815 1067 ntBASIC14.51□□□□□ -0.09
ABCD3P28288 MEIS3P1-201ENST00000495167 958 ntBASIC14.51□□□□□ -0.09
ABCD3P28288 TERF1P3-201ENST00000505638 1227 ntBASIC14.51□□□□□ -0.09
ABCD3P28288 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.51□□□□□ -0.09
ABCD3P28288 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.51□□□□□ -0.09
ABCD3P28288 AC004233.3-201ENST00000607794 1269 ntBASIC14.51□□□□□ -0.09
ABCD3P28288 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.51□□□□□ -0.09
ABCD3P28288 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ABCD3P28288 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.51□□□□□ -0.09
ABCD3P28288 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ABCD3P28288 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ABCD3P28288 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ABCD3P28288 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ABCD3P28288 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ABCD3P28288 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ABCD3P28288 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ABCD3P28288 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
ABCD3P28288 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ABCD3P28288 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.51□□□□□ -0.09
ABCD3P28288 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
ABCD3P28288 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.5□□□□□ -0.09
ABCD3P28288 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
ABCD3P28288 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ABCD3P28288 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ABCD3P28288 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.5□□□□□ -0.09
ABCD3P28288 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
ABCD3P28288 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.5□□□□□ -0.09
ABCD3P28288 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.5□□□□□ -0.09
ABCD3P28288 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.5□□□□□ -0.09
ABCD3P28288 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.5□□□□□ -0.09
ABCD3P28288 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.5□□□□□ -0.09
ABCD3P28288 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
ABCD3P28288 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ABCD3P28288 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
ABCD3P28288 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ABCD3P28288 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.5□□□□□ -0.09
ABCD3P28288 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
ABCD3P28288 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.5□□□□□ -0.09
ABCD3P28288 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.5□□□□□ -0.09
ABCD3P28288 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
ABCD3P28288 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ABCD3P28288 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.5□□□□□ -0.09
ABCD3P28288 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ABCD3P28288 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.5□□□□□ -0.09
ABCD3P28288 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms