Protein–RNA interactions for Protein: P20648

ATP4A, Potassium-transporting ATPase alpha chain 1, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP4AP20648 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ATP4AP20648 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ATP4AP20648 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP4AP20648 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATP4AP20648 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
ATP4AP20648 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ATP4AP20648 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP4AP20648 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP4AP20648 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.4■□□□□ 0.38
ATP4AP20648 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
ATP4AP20648 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.4■□□□□ 0.38
ATP4AP20648 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP4AP20648 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP4AP20648 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC17.4■□□□□ 0.38
ATP4AP20648 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ATP4AP20648 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
ATP4AP20648 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP4AP20648 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC17.4■□□□□ 0.38
ATP4AP20648 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
ATP4AP20648 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
ATP4AP20648 ACTG1P3-201ENST00000431775 1114 ntBASIC17.4■□□□□ 0.38
ATP4AP20648 AL162726.2-201ENST00000438986 1017 ntBASIC17.4■□□□□ 0.38
ATP4AP20648 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ATP4AP20648 MIR5189-201ENST00000577370 114 ntBASIC17.4■□□□□ 0.38
ATP4AP20648 UBL5-208ENST00000593087 320 ntTSL 3 BASIC17.4■□□□□ 0.38
ATP4AP20648 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
ATP4AP20648 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC17.4■□□□□ 0.38
ATP4AP20648 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC17.4■□□□□ 0.38
ATP4AP20648 AL008721.1-201ENST00000609964 604 ntBASIC17.4■□□□□ 0.38
ATP4AP20648 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP4AP20648 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ATP4AP20648 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC17.4■□□□□ 0.38
ATP4AP20648 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP4AP20648 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP4AP20648 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ATP4AP20648 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ATP4AP20648 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.4■□□□□ 0.38
ATP4AP20648 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.4■□□□□ 0.38
ATP4AP20648 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP4AP20648 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC17.4■□□□□ 0.38
ATP4AP20648 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC17.4■□□□□ 0.38
ATP4AP20648 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.4■□□□□ 0.38
ATP4AP20648 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
ATP4AP20648 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ATP4AP20648 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATP4AP20648 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC17.39■□□□□ 0.38
ATP4AP20648 OR6D1P-203ENST00000641209 4860 ntBASIC17.39■□□□□ 0.38
ATP4AP20648 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
ATP4AP20648 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
ATP4AP20648 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
ATP4AP20648 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATP4AP20648 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ATP4AP20648 MFF-204ENST00000353339 2186 ntTSL 5 BASIC17.39■□□□□ 0.37
ATP4AP20648 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATP4AP20648 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATP4AP20648 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATP4AP20648 USE1-206ENST00000595101 1776 ntTSL 2 BASIC17.39■□□□□ 0.37
ATP4AP20648 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
ATP4AP20648 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATP4AP20648 C1QBPP1-201ENST00000400117 770 ntBASIC17.39■□□□□ 0.37
ATP4AP20648 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC17.39■□□□□ 0.37
ATP4AP20648 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ATP4AP20648 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC17.39■□□□□ 0.37
ATP4AP20648 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC17.39■□□□□ 0.37
ATP4AP20648 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATP4AP20648 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ATP4AP20648 GPR53P-205ENST00000457298 1084 ntBASIC17.39■□□□□ 0.37
ATP4AP20648 IGHV3-71-201ENST00000523324 359 ntBASIC17.39■□□□□ 0.37
ATP4AP20648 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC17.39■□□□□ 0.37
ATP4AP20648 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC17.39■□□□□ 0.37
ATP4AP20648 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ATP4AP20648 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC17.39■□□□□ 0.37
ATP4AP20648 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC17.39■□□□□ 0.37
ATP4AP20648 AL512343.1-201ENST00000605837 169 ntBASIC17.39■□□□□ 0.37
ATP4AP20648 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC17.39■□□□□ 0.37
ATP4AP20648 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATP4AP20648 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATP4AP20648 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC17.39■□□□□ 0.37
ATP4AP20648 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ATP4AP20648 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATP4AP20648 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATP4AP20648 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
ATP4AP20648 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATP4AP20648 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ATP4AP20648 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC17.39■□□□□ 0.37
ATP4AP20648 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATP4AP20648 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.39■□□□□ 0.37
ATP4AP20648 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.39■□□□□ 0.37
ATP4AP20648 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC17.38■□□□□ 0.37
ATP4AP20648 MSTO2P-201ENST00000314835 1709 ntBASIC17.38■□□□□ 0.37
ATP4AP20648 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATP4AP20648 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATP4AP20648 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ATP4AP20648 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.38■□□□□ 0.37
ATP4AP20648 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
ATP4AP20648 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ATP4AP20648 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC17.38■□□□□ 0.37
ATP4AP20648 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ATP4AP20648 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATP4AP20648 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms