Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMPD1P17405 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
SMPD1P17405 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMPD1P17405 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC17.32■□□□□ 0.36
SMPD1P17405 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC17.32■□□□□ 0.36
SMPD1P17405 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
SMPD1P17405 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC17.32■□□□□ 0.36
SMPD1P17405 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
SMPD1P17405 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC17.32■□□□□ 0.36
SMPD1P17405 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SMPD1P17405 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC17.32■□□□□ 0.36
SMPD1P17405 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC17.32■□□□□ 0.36
SMPD1P17405 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMPD1P17405 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SMPD1P17405 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
SMPD1P17405 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
SMPD1P17405 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SMPD1P17405 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMPD1P17405 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMPD1P17405 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMPD1P17405 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMPD1P17405 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
SMPD1P17405 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SMPD1P17405 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SMPD1P17405 AMT-224ENST00000635808 1610 ntTSL 5 BASIC17.32■□□□□ 0.36
SMPD1P17405 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMPD1P17405 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMPD1P17405 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.32■□□□□ 0.36
SMPD1P17405 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMPD1P17405 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
SMPD1P17405 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SMPD1P17405 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.31■□□□□ 0.36
SMPD1P17405 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SMPD1P17405 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.31■□□□□ 0.36
SMPD1P17405 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMPD1P17405 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMPD1P17405 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SMPD1P17405 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMPD1P17405 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.31■□□□□ 0.36
SMPD1P17405 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMPD1P17405 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.31■□□□□ 0.36
SMPD1P17405 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMPD1P17405 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMPD1P17405 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.31■□□□□ 0.36
SMPD1P17405 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMPD1P17405 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMPD1P17405 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMPD1P17405 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
SMPD1P17405 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SMPD1P17405 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMPD1P17405 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMPD1P17405 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC17.31■□□□□ 0.36
SMPD1P17405 MTX1P1-201ENST00000440904 838 ntBASIC17.31■□□□□ 0.36
SMPD1P17405 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC17.31■□□□□ 0.36
SMPD1P17405 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC17.31■□□□□ 0.36
SMPD1P17405 PFN2-205ENST00000461868 613 ntTSL 2 BASIC17.31■□□□□ 0.36
SMPD1P17405 OARD1-212ENST00000482515 832 ntTSL 2 BASIC17.31■□□□□ 0.36
SMPD1P17405 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC17.31■□□□□ 0.36
SMPD1P17405 RN7SL48P-201ENST00000579283 293 ntBASIC17.31■□□□□ 0.36
SMPD1P17405 EEF1DP1-201ENST00000585891 896 ntBASIC17.31■□□□□ 0.36
SMPD1P17405 CYGB-203ENST00000589145 788 ntTSL 3 BASIC17.31■□□□□ 0.36
SMPD1P17405 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
SMPD1P17405 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC17.31■□□□□ 0.36
SMPD1P17405 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC17.31■□□□□ 0.36
SMPD1P17405 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC17.31■□□□□ 0.36
SMPD1P17405 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC17.31■□□□□ 0.36
SMPD1P17405 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMPD1P17405 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMPD1P17405 TKT-202ENST00000423516 2075 ntTSL 2 BASIC17.31■□□□□ 0.36
SMPD1P17405 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
SMPD1P17405 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SMPD1P17405 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.31■□□□□ 0.36
SMPD1P17405 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMPD1P17405 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17.31■□□□□ 0.36
SMPD1P17405 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMPD1P17405 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMPD1P17405 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SMPD1P17405 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.31■□□□□ 0.36
SMPD1P17405 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SMPD1P17405 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SMPD1P17405 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.3■□□□□ 0.36
SMPD1P17405 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMPD1P17405 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC17.3■□□□□ 0.36
SMPD1P17405 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMPD1P17405 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC17.3■□□□□ 0.36
SMPD1P17405 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMPD1P17405 TPM3P8-201ENST00000330554 643 ntBASIC17.3■□□□□ 0.36
SMPD1P17405 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SMPD1P17405 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SMPD1P17405 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC17.3■□□□□ 0.36
SMPD1P17405 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SMPD1P17405 NUS1P3-201ENST00000423502 862 ntBASIC17.3■□□□□ 0.36
SMPD1P17405 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMPD1P17405 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC17.3■□□□□ 0.36
SMPD1P17405 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMPD1P17405 AC104982.3-201ENST00000581995 514 ntBASIC17.3■□□□□ 0.36
SMPD1P17405 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC17.3■□□□□ 0.36
SMPD1P17405 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
SMPD1P17405 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
SMPD1P17405 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms