Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
KRT3P12035 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRT3P12035 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
KRT3P12035 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
KRT3P12035 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
KRT3P12035 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT3P12035 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT3P12035 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT3P12035 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT3P12035 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT3P12035 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.61■□□□□ 0.25
KRT3P12035 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
KRT3P12035 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.61■□□□□ 0.25
KRT3P12035 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT3P12035 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT3P12035 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT3P12035 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.61■□□□□ 0.25
KRT3P12035 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT3P12035 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
KRT3P12035 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
KRT3P12035 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT3P12035 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
KRT3P12035 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT3P12035 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT3P12035 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
KRT3P12035 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT3P12035 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.61■□□□□ 0.25
KRT3P12035 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
KRT3P12035 AC107890.1-201ENST00000422478 521 ntBASIC16.61■□□□□ 0.25
KRT3P12035 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.61■□□□□ 0.25
KRT3P12035 AC067863.1-201ENST00000494933 530 ntBASIC16.61■□□□□ 0.25
KRT3P12035 AC069120.2-201ENST00000524091 540 ntBASIC16.61■□□□□ 0.25
KRT3P12035 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.61■□□□□ 0.25
KRT3P12035 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.61■□□□□ 0.25
KRT3P12035 AC140878.1-201ENST00000565277 250 ntBASIC16.61■□□□□ 0.25
KRT3P12035 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.61■□□□□ 0.25
KRT3P12035 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.61■□□□□ 0.25
KRT3P12035 AL138828.2-201ENST00000615812 383 ntBASIC16.61■□□□□ 0.25
KRT3P12035 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT3P12035 AL033527.5-202ENST00000641632 1098 ntBASIC16.61■□□□□ 0.25
KRT3P12035 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.61■□□□□ 0.25
KRT3P12035 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT3P12035 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.61■□□□□ 0.25
KRT3P12035 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT3P12035 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC16.61■□□□□ 0.25
KRT3P12035 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT3P12035 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
KRT3P12035 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
KRT3P12035 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT3P12035 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
KRT3P12035 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
KRT3P12035 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.61■□□□□ 0.25
KRT3P12035 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
KRT3P12035 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
KRT3P12035 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT3P12035 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.61■□□□□ 0.25
KRT3P12035 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT3P12035 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
KRT3P12035 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
KRT3P12035 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT3P12035 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT3P12035 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
KRT3P12035 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.6■□□□□ 0.25
KRT3P12035 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT3P12035 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT3P12035 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.6■□□□□ 0.25
KRT3P12035 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT3P12035 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
KRT3P12035 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
KRT3P12035 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT3P12035 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.6■□□□□ 0.25
KRT3P12035 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
KRT3P12035 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
KRT3P12035 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC16.6■□□□□ 0.25
KRT3P12035 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT3P12035 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.6■□□□□ 0.25
KRT3P12035 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
KRT3P12035 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
KRT3P12035 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
KRT3P12035 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT3P12035 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
KRT3P12035 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT3P12035 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT3P12035 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT3P12035 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.6■□□□□ 0.25
KRT3P12035 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.6■□□□□ 0.25
KRT3P12035 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.6■□□□□ 0.25
KRT3P12035 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.6■□□□□ 0.25
KRT3P12035 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.6■□□□□ 0.25
KRT3P12035 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
KRT3P12035 TARDBPP1-201ENST00000442013 1203 ntBASIC16.6■□□□□ 0.25
KRT3P12035 FAM86GP-201ENST00000448322 971 ntBASIC16.6■□□□□ 0.25
KRT3P12035 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.6■□□□□ 0.25
KRT3P12035 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT3P12035 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.6■□□□□ 0.25
KRT3P12035 TEX28P1-201ENST00000613479 1221 ntBASIC16.6■□□□□ 0.25
KRT3P12035 TEX28P2-201ENST00000617764 1221 ntBASIC16.6■□□□□ 0.25
KRT3P12035 AC073592.8-201ENST00000624126 511 ntBASIC16.6■□□□□ 0.25
KRT3P12035 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
KRT3P12035 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms