Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TPM1P09493 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TPM1P09493 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TPM1P09493 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TPM1P09493 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
TPM1P09493 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TPM1P09493 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.43■□□□□ 0.38
TPM1P09493 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TPM1P09493 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.43■□□□□ 0.38
TPM1P09493 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
TPM1P09493 AC096734.2-201ENST00000562054 433 ntBASIC17.43■□□□□ 0.38
TPM1P09493 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.43■□□□□ 0.38
TPM1P09493 AL121912.1-201ENST00000603683 238 ntBASIC17.43■□□□□ 0.38
TPM1P09493 AC023141.13-201ENST00000604991 943 ntBASIC17.43■□□□□ 0.38
TPM1P09493 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC17.43■□□□□ 0.38
TPM1P09493 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
TPM1P09493 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.43■□□□□ 0.38
TPM1P09493 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC17.43■□□□□ 0.38
TPM1P09493 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
TPM1P09493 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TPM1P09493 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TPM1P09493 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TPM1P09493 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
TPM1P09493 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC17.43■□□□□ 0.38
TPM1P09493 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
TPM1P09493 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC17.42■□□□□ 0.38
TPM1P09493 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TPM1P09493 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TPM1P09493 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TPM1P09493 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TPM1P09493 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TPM1P09493 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC17.42■□□□□ 0.38
TPM1P09493 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TPM1P09493 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TPM1P09493 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TPM1P09493 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TPM1P09493 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TPM1P09493 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TPM1P09493 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TPM1P09493 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TPM1P09493 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.42■□□□□ 0.38
TPM1P09493 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.42■□□□□ 0.38
TPM1P09493 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
TPM1P09493 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.42■□□□□ 0.38
TPM1P09493 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
TPM1P09493 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC17.42■□□□□ 0.38
TPM1P09493 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC17.42■□□□□ 0.38
TPM1P09493 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TPM1P09493 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.42■□□□□ 0.38
TPM1P09493 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TPM1P09493 FAM215A-202ENST00000632077 792 ntBASIC17.42■□□□□ 0.38
TPM1P09493 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC17.42■□□□□ 0.38
TPM1P09493 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
TPM1P09493 CTBP1-AS2-206ENST00000581398 5652 ntBASIC17.42■□□□□ 0.38
TPM1P09493 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TPM1P09493 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
TPM1P09493 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TPM1P09493 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.42■□□□□ 0.38
TPM1P09493 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TPM1P09493 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TPM1P09493 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TPM1P09493 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.42■□□□□ 0.38
TPM1P09493 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC17.42■□□□□ 0.38
TPM1P09493 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
TPM1P09493 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TPM1P09493 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.42■□□□□ 0.38
TPM1P09493 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TPM1P09493 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC17.42■□□□□ 0.38
TPM1P09493 FLII-221ENST00000578558 2377 ntTSL 5 BASIC17.42■□□□□ 0.38
TPM1P09493 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TPM1P09493 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
TPM1P09493 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TPM1P09493 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TPM1P09493 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.41■□□□□ 0.38
TPM1P09493 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TPM1P09493 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
TPM1P09493 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC17.41■□□□□ 0.38
TPM1P09493 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TPM1P09493 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC17.41■□□□□ 0.38
TPM1P09493 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TPM1P09493 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TPM1P09493 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TPM1P09493 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TPM1P09493 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TPM1P09493 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
TPM1P09493 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TPM1P09493 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TPM1P09493 AC140658.5-201ENST00000438532 169 ntBASIC17.41■□□□□ 0.38
TPM1P09493 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.41■□□□□ 0.38
TPM1P09493 UNC93B6-202ENST00000528242 690 ntBASIC17.41■□□□□ 0.38
TPM1P09493 AC024267.1-201ENST00000582320 895 ntBASIC17.41■□□□□ 0.38
TPM1P09493 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC17.41■□□□□ 0.38
TPM1P09493 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
TPM1P09493 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
TPM1P09493 BANP-203ENST00000393207 2438 ntTSL 2 BASIC17.41■□□□□ 0.38
TPM1P09493 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TPM1P09493 AC232323.1-201ENST00000540724 2099 ntBASIC17.41■□□□□ 0.38
TPM1P09493 REXO1L5P-201ENST00000622260 2098 ntBASIC17.41■□□□□ 0.38
TPM1P09493 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TPM1P09493 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms