Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD48P09326 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.31■□□□□ 0.2
CD48P09326 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD48P09326 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD48P09326 KRT8P44-201ENST00000441609 1350 ntBASIC16.31■□□□□ 0.2
CD48P09326 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.31■□□□□ 0.2
CD48P09326 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.31■□□□□ 0.2
CD48P09326 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.31■□□□□ 0.2
CD48P09326 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD48P09326 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD48P09326 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD48P09326 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD48P09326 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD48P09326 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.31■□□□□ 0.2
CD48P09326 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.31■□□□□ 0.2
CD48P09326 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.31■□□□□ 0.2
CD48P09326 KLF2P3-201ENST00000451977 1087 ntBASIC16.31■□□□□ 0.2
CD48P09326 HLA-V-204ENST00000476601 1289 ntBASIC16.31■□□□□ 0.2
CD48P09326 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.31■□□□□ 0.2
CD48P09326 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.31■□□□□ 0.2
CD48P09326 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.31■□□□□ 0.2
CD48P09326 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CD48P09326 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD48P09326 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.31■□□□□ 0.2
CD48P09326 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.31■□□□□ 0.2
CD48P09326 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CD48P09326 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD48P09326 ZEB1-AS1-208ENST00000607166 2503 ntBASIC16.31■□□□□ 0.2
CD48P09326 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD48P09326 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.31■□□□□ 0.2
CD48P09326 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC16.31■□□□□ 0.2
CD48P09326 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CD48P09326 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.31■□□□□ 0.2
CD48P09326 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD48P09326 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CD48P09326 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD48P09326 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD48P09326 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD48P09326 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
CD48P09326 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CD48P09326 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD48P09326 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CD48P09326 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CD48P09326 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.3■□□□□ 0.2
CD48P09326 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CD48P09326 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CD48P09326 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
CD48P09326 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CD48P09326 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CD48P09326 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.3■□□□□ 0.2
CD48P09326 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.3■□□□□ 0.2
CD48P09326 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CD48P09326 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CD48P09326 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CD48P09326 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CD48P09326 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CD48P09326 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.3■□□□□ 0.2
CD48P09326 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CD48P09326 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.3■□□□□ 0.2
CD48P09326 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CD48P09326 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CD48P09326 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CD48P09326 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CD48P09326 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CD48P09326 AC092580.3-201ENST00000430932 139 ntBASIC16.3■□□□□ 0.2
CD48P09326 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CD48P09326 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.3■□□□□ 0.2
CD48P09326 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.3■□□□□ 0.2
CD48P09326 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.3■□□□□ 0.2
CD48P09326 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CD48P09326 AC025678.2-201ENST00000562061 970 ntBASIC16.3■□□□□ 0.2
CD48P09326 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.3■□□□□ 0.2
CD48P09326 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CD48P09326 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.3■□□□□ 0.2
CD48P09326 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.3■□□□□ 0.2
CD48P09326 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CD48P09326 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CD48P09326 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CD48P09326 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CD48P09326 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CD48P09326 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC16.3■□□□□ 0.2
CD48P09326 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CD48P09326 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CD48P09326 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CD48P09326 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.3■□□□□ 0.2
CD48P09326 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CD48P09326 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.3■□□□□ 0.2
CD48P09326 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.3■□□□□ 0.2
CD48P09326 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.3■□□□□ 0.2
CD48P09326 Z97205.2-201ENST00000564697 1639 ntBASIC16.3■□□□□ 0.2
CD48P09326 AC099063.4-201ENST00000641099 1602 ntBASIC16.3■□□□□ 0.2
CD48P09326 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CD48P09326 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.3■□□□□ 0.2
CD48P09326 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CD48P09326 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CD48P09326 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CD48P09326 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CD48P09326 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CD48P09326 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CD48P09326 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms