Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL5A2P05997 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COL5A2P05997 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
COL5A2P05997 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL5A2P05997 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL5A2P05997 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL5A2P05997 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL5A2P05997 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC20.24■□□□□ 0.83
COL5A2P05997 AC019193.1-201ENST00000506678 823 ntBASIC20.24■□□□□ 0.83
COL5A2P05997 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC20.24■□□□□ 0.83
COL5A2P05997 NPM1P43-201ENST00000558669 786 ntBASIC20.24■□□□□ 0.83
COL5A2P05997 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC20.24■□□□□ 0.83
COL5A2P05997 MIR4750-201ENST00000584564 56 ntBASIC20.24■□□□□ 0.83
COL5A2P05997 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL5A2P05997 AC073352.2-201ENST00000609385 439 ntBASIC20.24■□□□□ 0.83
COL5A2P05997 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC20.24■□□□□ 0.83
COL5A2P05997 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC20.23■□□□□ 0.83
COL5A2P05997 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL5A2P05997 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL5A2P05997 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL5A2P05997 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
COL5A2P05997 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
COL5A2P05997 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
COL5A2P05997 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
COL5A2P05997 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL5A2P05997 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL5A2P05997 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
COL5A2P05997 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC20.23■□□□□ 0.83
COL5A2P05997 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
COL5A2P05997 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC20.23■□□□□ 0.83
COL5A2P05997 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
COL5A2P05997 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
COL5A2P05997 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
COL5A2P05997 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC20.23■□□□□ 0.83
COL5A2P05997 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC20.23■□□□□ 0.83
COL5A2P05997 FGFR3P1-201ENST00000449999 601 ntBASIC20.23■□□□□ 0.83
COL5A2P05997 AC104073.2-201ENST00000453737 312 ntBASIC20.23■□□□□ 0.83
COL5A2P05997 TUBB8P8-201ENST00000458717 1058 ntBASIC20.23■□□□□ 0.83
COL5A2P05997 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC20.23■□□□□ 0.83
COL5A2P05997 AC242376.1-201ENST00000559033 726 ntBASIC20.23■□□□□ 0.83
COL5A2P05997 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC20.23■□□□□ 0.83
COL5A2P05997 MIR4754-201ENST00000582477 89 ntBASIC20.23■□□□□ 0.83
COL5A2P05997 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC20.23■□□□□ 0.83
COL5A2P05997 AC022211.2-201ENST00000585075 2527 ntBASIC20.23■□□□□ 0.83
COL5A2P05997 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
COL5A2P05997 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC20.23■□□□□ 0.83
COL5A2P05997 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL5A2P05997 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC20.23■□□□□ 0.83
COL5A2P05997 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC20.22■□□□□ 0.83
COL5A2P05997 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL5A2P05997 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL5A2P05997 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
COL5A2P05997 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
COL5A2P05997 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL5A2P05997 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL5A2P05997 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL5A2P05997 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL5A2P05997 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
COL5A2P05997 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL5A2P05997 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
COL5A2P05997 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC20.22■□□□□ 0.83
COL5A2P05997 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC20.22■□□□□ 0.83
COL5A2P05997 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC20.22■□□□□ 0.83
COL5A2P05997 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL5A2P05997 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL5A2P05997 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL5A2P05997 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL5A2P05997 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL5A2P05997 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL5A2P05997 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL5A2P05997 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC20.22■□□□□ 0.83
COL5A2P05997 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL5A2P05997 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
COL5A2P05997 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
COL5A2P05997 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
COL5A2P05997 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL5A2P05997 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL5A2P05997 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL5A2P05997 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC20.21■□□□□ 0.83
COL5A2P05997 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL5A2P05997 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL5A2P05997 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL5A2P05997 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL5A2P05997 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
COL5A2P05997 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC20.21■□□□□ 0.83
COL5A2P05997 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL5A2P05997 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL5A2P05997 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
COL5A2P05997 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
COL5A2P05997 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC20.21■□□□□ 0.83
COL5A2P05997 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL5A2P05997 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
COL5A2P05997 AC006335.1-201ENST00000445200 547 ntBASIC20.21■□□□□ 0.83
COL5A2P05997 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC20.21■□□□□ 0.83
COL5A2P05997 RN7SL163P-201ENST00000583100 276 ntBASIC20.21■□□□□ 0.83
COL5A2P05997 YRDCP1-201ENST00000621419 643 ntBASIC20.21■□□□□ 0.83
COL5A2P05997 AC011491.1-203ENST00000637688 543 ntBASIC20.21■□□□□ 0.83
COL5A2P05997 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC20.21■□□□□ 0.83
COL5A2P05997 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL5A2P05997 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms