Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC14.81□□□□□ -0.04
PDGFAP04085 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.81□□□□□ -0.04
PDGFAP04085 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PDGFAP04085 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PDGFAP04085 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PDGFAP04085 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PDGFAP04085 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PDGFAP04085 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.81□□□□□ -0.04
PDGFAP04085 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PDGFAP04085 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
PDGFAP04085 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.81□□□□□ -0.04
PDGFAP04085 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PDGFAP04085 CLK3P2-201ENST00000427566 1453 ntBASIC14.81□□□□□ -0.04
PDGFAP04085 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
PDGFAP04085 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.81□□□□□ -0.04
PDGFAP04085 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
PDGFAP04085 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PDGFAP04085 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PDGFAP04085 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PDGFAP04085 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.81□□□□□ -0.04
PDGFAP04085 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
PDGFAP04085 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PDGFAP04085 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PDGFAP04085 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
PDGFAP04085 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.8□□□□□ -0.04
PDGFAP04085 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PDGFAP04085 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PDGFAP04085 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PDGFAP04085 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PDGFAP04085 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PDGFAP04085 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
PDGFAP04085 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PDGFAP04085 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
PDGFAP04085 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.8□□□□□ -0.04
PDGFAP04085 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PDGFAP04085 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PDGFAP04085 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
PDGFAP04085 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
PDGFAP04085 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PDGFAP04085 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PDGFAP04085 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
PDGFAP04085 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PDGFAP04085 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PDGFAP04085 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PDGFAP04085 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PDGFAP04085 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC14.8□□□□□ -0.04
PDGFAP04085 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PDGFAP04085 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.8□□□□□ -0.04
PDGFAP04085 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PDGFAP04085 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC14.8□□□□□ -0.04
PDGFAP04085 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.8□□□□□ -0.04
PDGFAP04085 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PDGFAP04085 MIR4538-201ENST00000581377 78 ntBASIC14.8□□□□□ -0.04
PDGFAP04085 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
PDGFAP04085 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PDGFAP04085 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PDGFAP04085 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PDGFAP04085 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC14.8□□□□□ -0.04
PDGFAP04085 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
PDGFAP04085 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PDGFAP04085 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PDGFAP04085 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.8□□□□□ -0.04
PDGFAP04085 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PDGFAP04085 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PDGFAP04085 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.8□□□□□ -0.04
PDGFAP04085 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
PDGFAP04085 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
PDGFAP04085 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
PDGFAP04085 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PDGFAP04085 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PDGFAP04085 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PDGFAP04085 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PDGFAP04085 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC14.8□□□□□ -0.04
PDGFAP04085 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.8□□□□□ -0.04
PDGFAP04085 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PDGFAP04085 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PDGFAP04085 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
PDGFAP04085 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC14.79□□□□□ -0.04
PDGFAP04085 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PDGFAP04085 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PDGFAP04085 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PDGFAP04085 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PDGFAP04085 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PDGFAP04085 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.79□□□□□ -0.04
PDGFAP04085 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PDGFAP04085 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PDGFAP04085 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PDGFAP04085 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PDGFAP04085 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
PDGFAP04085 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
PDGFAP04085 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC14.79□□□□□ -0.04
PDGFAP04085 HCG24-202ENST00000414398 717 ntTSL 3 BASIC14.79□□□□□ -0.04
PDGFAP04085 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PDGFAP04085 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC14.79□□□□□ -0.04
PDGFAP04085 HIST3H2BA-201ENST00000436555 524 ntBASIC14.79□□□□□ -0.04
PDGFAP04085 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC14.79□□□□□ -0.04
PDGFAP04085 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.79□□□□□ -0.04
PDGFAP04085 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
PDGFAP04085 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PDGFAP04085 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms