Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC14.94□□□□□ -0.02
MT-ND1P03886 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.94□□□□□ -0.02
MT-ND1P03886 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.94□□□□□ -0.02
MT-ND1P03886 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
MT-ND1P03886 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.94□□□□□ -0.02
MT-ND1P03886 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
MT-ND1P03886 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
MT-ND1P03886 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
MT-ND1P03886 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
MT-ND1P03886 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.94□□□□□ -0.02
MT-ND1P03886 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.94□□□□□ -0.02
MT-ND1P03886 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC14.94□□□□□ -0.02
MT-ND1P03886 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.94□□□□□ -0.02
MT-ND1P03886 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
MT-ND1P03886 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
MT-ND1P03886 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MT-ND1P03886 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.94□□□□□ -0.02
MT-ND1P03886 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
MT-ND1P03886 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
MT-ND1P03886 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MT-ND1P03886 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MT-ND1P03886 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MT-ND1P03886 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MT-ND1P03886 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MT-ND1P03886 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MT-ND1P03886 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.94□□□□□ -0.02
MT-ND1P03886 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
MT-ND1P03886 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
MT-ND1P03886 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MT-ND1P03886 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MT-ND1P03886 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.93□□□□□ -0.02
MT-ND1P03886 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.93□□□□□ -0.02
MT-ND1P03886 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
MT-ND1P03886 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.93□□□□□ -0.02
MT-ND1P03886 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
MT-ND1P03886 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
MT-ND1P03886 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
MT-ND1P03886 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MT-ND1P03886 AC023024.2-201ENST00000623561 1993 ntBASIC14.93□□□□□ -0.02
MT-ND1P03886 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.93□□□□□ -0.02
MT-ND1P03886 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.93□□□□□ -0.02
MT-ND1P03886 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MT-ND1P03886 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MT-ND1P03886 AC097376.2-205ENST00000610159 5334 ntBASIC14.93□□□□□ -0.02
MT-ND1P03886 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.93□□□□□ -0.02
MT-ND1P03886 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MT-ND1P03886 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
MT-ND1P03886 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
MT-ND1P03886 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MT-ND1P03886 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
MT-ND1P03886 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MT-ND1P03886 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
MT-ND1P03886 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.93□□□□□ -0.02
MT-ND1P03886 CSF3-203ENST00000394148 622 ntTSL 3 BASIC14.93□□□□□ -0.02
MT-ND1P03886 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC14.93□□□□□ -0.02
MT-ND1P03886 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.93□□□□□ -0.02
MT-ND1P03886 AC009947.1-201ENST00000444350 727 ntBASIC14.93□□□□□ -0.02
MT-ND1P03886 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
MT-ND1P03886 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
MT-ND1P03886 AL365330.1-201ENST00000607459 531 ntBASIC14.93□□□□□ -0.02
MT-ND1P03886 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.93□□□□□ -0.02
MT-ND1P03886 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.93□□□□□ -0.02
MT-ND1P03886 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MT-ND1P03886 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
MT-ND1P03886 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
MT-ND1P03886 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MT-ND1P03886 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
MT-ND1P03886 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.93□□□□□ -0.02
MT-ND1P03886 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MT-ND1P03886 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MT-ND1P03886 AP001282.1-201ENST00000531301 1499 ntBASIC14.93□□□□□ -0.02
MT-ND1P03886 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MT-ND1P03886 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MT-ND1P03886 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
MT-ND1P03886 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.93□□□□□ -0.02
MT-ND1P03886 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MT-ND1P03886 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
MT-ND1P03886 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC14.93□□□□□ -0.02
MT-ND1P03886 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
MT-ND1P03886 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
MT-ND1P03886 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MT-ND1P03886 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
MT-ND1P03886 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.92□□□□□ -0.02
MT-ND1P03886 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.92□□□□□ -0.02
MT-ND1P03886 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.92□□□□□ -0.02
MT-ND1P03886 AC127383.1-201ENST00000444697 1800 ntBASIC14.92□□□□□ -0.02
MT-ND1P03886 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
MT-ND1P03886 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MT-ND1P03886 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
MT-ND1P03886 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MT-ND1P03886 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.92□□□□□ -0.02
MT-ND1P03886 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
MT-ND1P03886 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
MT-ND1P03886 IGLL3P-201ENST00000412472 434 ntBASIC14.92□□□□□ -0.02
MT-ND1P03886 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.92□□□□□ -0.02
MT-ND1P03886 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.92□□□□□ -0.02
MT-ND1P03886 AP001005.1-201ENST00000571755 1248 ntBASIC14.92□□□□□ -0.02
MT-ND1P03886 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.92□□□□□ -0.02
MT-ND1P03886 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
MT-ND1P03886 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms