Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC12.65□□□□□ -0.38
APOC3P02656 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
APOC3P02656 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
APOC3P02656 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
APOC3P02656 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
APOC3P02656 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
APOC3P02656 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC12.65□□□□□ -0.38
APOC3P02656 MFAP1P1-201ENST00000442257 1255 ntBASIC12.65□□□□□ -0.38
APOC3P02656 AF201337.1-201ENST00000520239 748 ntBASIC12.65□□□□□ -0.38
APOC3P02656 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
APOC3P02656 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
APOC3P02656 LINC01238-205ENST00000567549 1107 ntBASIC12.65□□□□□ -0.38
APOC3P02656 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC12.65□□□□□ -0.38
APOC3P02656 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC12.65□□□□□ -0.38
APOC3P02656 AC005332.3-201ENST00000589904 676 ntBASIC12.65□□□□□ -0.38
APOC3P02656 MDK-213ENST00000617138 635 ntTSL 2 BASIC12.65□□□□□ -0.38
APOC3P02656 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
APOC3P02656 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
APOC3P02656 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
APOC3P02656 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
APOC3P02656 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC12.65□□□□□ -0.38
APOC3P02656 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
APOC3P02656 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
APOC3P02656 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
APOC3P02656 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
APOC3P02656 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
APOC3P02656 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
APOC3P02656 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
APOC3P02656 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC12.65□□□□□ -0.38
APOC3P02656 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
APOC3P02656 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
APOC3P02656 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
APOC3P02656 CSPG4P11-201ENST00000560634 4910 ntBASIC12.65□□□□□ -0.38
APOC3P02656 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.39
APOC3P02656 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
APOC3P02656 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
APOC3P02656 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
APOC3P02656 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC12.65□□□□□ -0.39
APOC3P02656 SULF1-202ENST00000402687 4891 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
APOC3P02656 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
APOC3P02656 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.39
APOC3P02656 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
APOC3P02656 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
APOC3P02656 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
APOC3P02656 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC12.64□□□□□ -0.39
APOC3P02656 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC12.64□□□□□ -0.39
APOC3P02656 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC12.64□□□□□ -0.39
APOC3P02656 AC097374.2-201ENST00000618617 1306 ntBASIC12.64□□□□□ -0.39
APOC3P02656 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
APOC3P02656 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
APOC3P02656 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC12.64□□□□□ -0.39
APOC3P02656 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
APOC3P02656 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC12.64□□□□□ -0.39
APOC3P02656 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
APOC3P02656 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
APOC3P02656 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC12.64□□□□□ -0.39
APOC3P02656 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
APOC3P02656 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC12.64□□□□□ -0.39
APOC3P02656 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
APOC3P02656 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
APOC3P02656 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
APOC3P02656 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
APOC3P02656 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
APOC3P02656 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC12.64□□□□□ -0.39
APOC3P02656 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
APOC3P02656 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
APOC3P02656 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC12.64□□□□□ -0.39
APOC3P02656 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC12.64□□□□□ -0.39
APOC3P02656 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC12.64□□□□□ -0.39
APOC3P02656 AC073912.3-201ENST00000624414 853 ntBASIC12.64□□□□□ -0.39
APOC3P02656 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
APOC3P02656 AL365181.3-201ENST00000605886 3222 ntBASIC12.64□□□□□ -0.39
APOC3P02656 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC12.64□□□□□ -0.39
APOC3P02656 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
APOC3P02656 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
APOC3P02656 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
APOC3P02656 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
APOC3P02656 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
APOC3P02656 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC12.64□□□□□ -0.39
APOC3P02656 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
APOC3P02656 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
APOC3P02656 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
APOC3P02656 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
APOC3P02656 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC12.64□□□□□ -0.39
APOC3P02656 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
APOC3P02656 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC12.64□□□□□ -0.39
APOC3P02656 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC12.64□□□□□ -0.39
APOC3P02656 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC12.64□□□□□ -0.39
APOC3P02656 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
APOC3P02656 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
APOC3P02656 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
APOC3P02656 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOC3P02656 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
APOC3P02656 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC12.63□□□□□ -0.39
APOC3P02656 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOC3P02656 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC12.63□□□□□ -0.39
APOC3P02656 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOC3P02656 ILF3-AS1-201ENST00000591501 1983 ntBASIC12.63□□□□□ -0.39
APOC3P02656 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
APOC3P02656 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms