Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL4A1P02462 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL4A1P02462 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC18.84■□□□□ 0.61
COL4A1P02462 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL4A1P02462 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC18.84■□□□□ 0.61
COL4A1P02462 STK33-217ENST00000534493 1895 ntTSL 2 BASIC18.84■□□□□ 0.61
COL4A1P02462 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC18.84■□□□□ 0.61
COL4A1P02462 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC18.84■□□□□ 0.61
COL4A1P02462 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
COL4A1P02462 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
COL4A1P02462 AL118508.1-201ENST00000613502 2345 ntBASIC18.83■□□□□ 0.61
COL4A1P02462 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
COL4A1P02462 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC18.83■□□□□ 0.61
COL4A1P02462 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
COL4A1P02462 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
COL4A1P02462 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.61
COL4A1P02462 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC18.83■□□□□ 0.61
COL4A1P02462 AC016700.1-201ENST00000429424 312 ntBASIC18.83■□□□□ 0.61
COL4A1P02462 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC18.83■□□□□ 0.61
COL4A1P02462 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.61
COL4A1P02462 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC18.83■□□□□ 0.61
COL4A1P02462 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC18.83■□□□□ 0.61
COL4A1P02462 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
COL4A1P02462 KLK11-210ENST00000600362 759 ntTSL 3 BASIC18.83■□□□□ 0.61
COL4A1P02462 AC097724.1-201ENST00000609581 426 ntBASIC18.83■□□□□ 0.61
COL4A1P02462 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC18.83■□□□□ 0.61
COL4A1P02462 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC18.83■□□□□ 0.61
COL4A1P02462 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
COL4A1P02462 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
COL4A1P02462 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC18.83■□□□□ 0.61
COL4A1P02462 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
COL4A1P02462 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC18.83■□□□□ 0.61
COL4A1P02462 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
COL4A1P02462 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.83■□□□□ 0.6
COL4A1P02462 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COL4A1P02462 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC18.83■□□□□ 0.6
COL4A1P02462 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
COL4A1P02462 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COL4A1P02462 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
COL4A1P02462 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COL4A1P02462 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
COL4A1P02462 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL4A1P02462 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL4A1P02462 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL4A1P02462 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
COL4A1P02462 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
COL4A1P02462 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC18.82■□□□□ 0.6
COL4A1P02462 AC079178.1-201ENST00000420915 656 ntBASIC18.82■□□□□ 0.6
COL4A1P02462 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC18.82■□□□□ 0.6
COL4A1P02462 AL354877.1-201ENST00000424412 413 ntBASIC18.82■□□□□ 0.6
COL4A1P02462 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
COL4A1P02462 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC18.82■□□□□ 0.6
COL4A1P02462 AC100850.1-201ENST00000506768 649 ntBASIC18.82■□□□□ 0.6
COL4A1P02462 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
COL4A1P02462 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC18.82■□□□□ 0.6
COL4A1P02462 MIR4683-201ENST00000579659 81 ntBASIC18.82■□□□□ 0.6
COL4A1P02462 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL4A1P02462 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL4A1P02462 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL4A1P02462 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL4A1P02462 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
COL4A1P02462 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL4A1P02462 AC009093.2-202ENST00000620513 2079 ntBASIC18.82■□□□□ 0.6
COL4A1P02462 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL4A1P02462 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC18.82■□□□□ 0.6
COL4A1P02462 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
COL4A1P02462 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.82■□□□□ 0.6
COL4A1P02462 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC18.82■□□□□ 0.6
COL4A1P02462 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL4A1P02462 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL4A1P02462 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL4A1P02462 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC18.82■□□□□ 0.6
COL4A1P02462 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL4A1P02462 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC18.82■□□□□ 0.6
COL4A1P02462 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC18.82■□□□□ 0.6
COL4A1P02462 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC18.82■□□□□ 0.6
COL4A1P02462 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC18.82■□□□□ 0.6
COL4A1P02462 CHMP1AP1-201ENST00000445563 662 ntBASIC18.82■□□□□ 0.6
COL4A1P02462 AC005077.2-201ENST00000449786 690 ntBASIC18.82■□□□□ 0.6
COL4A1P02462 EIF4HP1-201ENST00000453115 687 ntBASIC18.82■□□□□ 0.6
COL4A1P02462 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC18.82■□□□□ 0.6
COL4A1P02462 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC18.82■□□□□ 0.6
COL4A1P02462 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC18.82■□□□□ 0.6
COL4A1P02462 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC18.82■□□□□ 0.6
COL4A1P02462 REXO1L5P-201ENST00000622260 2098 ntBASIC18.82■□□□□ 0.6
COL4A1P02462 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COL4A1P02462 AL391005.1-201ENST00000623953 2435 ntBASIC18.81■□□□□ 0.6
COL4A1P02462 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL4A1P02462 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL4A1P02462 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC18.81■□□□□ 0.6
COL4A1P02462 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC18.81■□□□□ 0.6
COL4A1P02462 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL4A1P02462 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC18.81■□□□□ 0.6
COL4A1P02462 AC105250.1-201ENST00000509378 2057 ntBASIC18.81■□□□□ 0.6
COL4A1P02462 AC138028.6-201ENST00000616106 1482 ntBASIC18.81■□□□□ 0.6
COL4A1P02462 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
COL4A1P02462 AP003680.1-201ENST00000598970 3660 ntBASIC18.81■□□□□ 0.6
COL4A1P02462 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL4A1P02462 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COL4A1P02462 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms