Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC11.9□□□□□ -0.5
LTAP01374 USP28-214ENST00000545540 3431 ntTSL 2 BASIC11.9□□□□□ -0.5
LTAP01374 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC11.9□□□□□ -0.5
LTAP01374 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LTAP01374 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LTAP01374 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC11.9□□□□□ -0.5
LTAP01374 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
LTAP01374 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
LTAP01374 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
LTAP01374 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC11.9□□□□□ -0.51
LTAP01374 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
LTAP01374 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.51
LTAP01374 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LTAP01374 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LTAP01374 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LTAP01374 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC11.89□□□□□ -0.51
LTAP01374 SBF1P1-201ENST00000444527 5631 ntBASIC11.89□□□□□ -0.51
LTAP01374 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LTAP01374 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC11.89□□□□□ -0.51
LTAP01374 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
LTAP01374 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
LTAP01374 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
LTAP01374 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LTAP01374 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
LTAP01374 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LTAP01374 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC11.89□□□□□ -0.51
LTAP01374 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LTAP01374 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LTAP01374 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LTAP01374 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
LTAP01374 AC004987.2-201ENST00000395959 1148 ntBASIC11.89□□□□□ -0.51
LTAP01374 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC11.89□□□□□ -0.51
LTAP01374 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC11.89□□□□□ -0.51
LTAP01374 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC11.89□□□□□ -0.51
LTAP01374 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC11.89□□□□□ -0.51
LTAP01374 AC105339.3-201ENST00000560043 636 ntBASIC11.89□□□□□ -0.51
LTAP01374 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC11.89□□□□□ -0.51
LTAP01374 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
LTAP01374 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC11.89□□□□□ -0.51
LTAP01374 AC005840.4-201ENST00000541242 2494 ntBASIC11.89□□□□□ -0.51
LTAP01374 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LTAP01374 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
LTAP01374 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
LTAP01374 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
LTAP01374 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LTAP01374 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
LTAP01374 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
LTAP01374 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
LTAP01374 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC11.89□□□□□ -0.51
LTAP01374 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LTAP01374 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
LTAP01374 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LTAP01374 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LTAP01374 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
LTAP01374 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
LTAP01374 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
LTAP01374 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
LTAP01374 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LTAP01374 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LTAP01374 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
LTAP01374 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
LTAP01374 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
LTAP01374 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC11.88□□□□□ -0.51
LTAP01374 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
LTAP01374 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LTAP01374 BX640514.1-201ENST00000583223 1918 ntBASIC11.88□□□□□ -0.51
LTAP01374 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC11.88□□□□□ -0.51
LTAP01374 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
LTAP01374 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LTAP01374 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC11.88□□□□□ -0.51
LTAP01374 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC11.88□□□□□ -0.51
LTAP01374 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC11.88□□□□□ -0.51
LTAP01374 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC11.88□□□□□ -0.51
LTAP01374 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC11.88□□□□□ -0.51
LTAP01374 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC11.88□□□□□ -0.51
LTAP01374 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LTAP01374 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
LTAP01374 INIP-202ENST00000374236 874 ntTSL 2 BASIC11.88□□□□□ -0.51
LTAP01374 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LTAP01374 DDT-204ENST00000404092 805 ntTSL 3 BASIC11.88□□□□□ -0.51
LTAP01374 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
LTAP01374 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LTAP01374 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC11.88□□□□□ -0.51
LTAP01374 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC11.88□□□□□ -0.51
LTAP01374 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC11.88□□□□□ -0.51
LTAP01374 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
LTAP01374 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC11.88□□□□□ -0.51
LTAP01374 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC11.88□□□□□ -0.51
LTAP01374 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LTAP01374 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC11.88□□□□□ -0.51
LTAP01374 AL450472.2-201ENST00000603663 1156 ntBASIC11.88□□□□□ -0.51
LTAP01374 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC11.88□□□□□ -0.51
LTAP01374 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC11.88□□□□□ -0.51
LTAP01374 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
LTAP01374 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
LTAP01374 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LTAP01374 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC11.88□□□□□ -0.51
LTAP01374 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
LTAP01374 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
LTAP01374 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC11.88□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms