Protein–RNA interactions for Protein: O96008

TOMM40, Mitochondrial import receptor subunit TOM40 homolog, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40O96008 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TOMM40O96008 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
TOMM40O96008 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TOMM40O96008 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
TOMM40O96008 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
TOMM40O96008 LRRFIP1P1-201ENST00000498774 2246 ntBASIC12.41□□□□□ -0.42
TOMM40O96008 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TOMM40O96008 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC12.41□□□□□ -0.42
TOMM40O96008 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TOMM40O96008 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
TOMM40O96008 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
TOMM40O96008 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TOMM40O96008 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TOMM40O96008 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TOMM40O96008 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TOMM40O96008 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
TOMM40O96008 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TOMM40O96008 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC12.4□□□□□ -0.42
TOMM40O96008 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TOMM40O96008 ILF3-AS1-201ENST00000591501 1983 ntBASIC12.4□□□□□ -0.42
TOMM40O96008 FLII-221ENST00000578558 2377 ntTSL 5 BASIC12.4□□□□□ -0.42
TOMM40O96008 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC12.4□□□□□ -0.42
TOMM40O96008 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
TOMM40O96008 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
TOMM40O96008 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TOMM40O96008 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TOMM40O96008 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC12.4□□□□□ -0.42
TOMM40O96008 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TOMM40O96008 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TOMM40O96008 TFAMP1-201ENST00000412727 736 ntBASIC12.4□□□□□ -0.42
TOMM40O96008 AL671277.1-201ENST00000429656 993 ntBASIC12.4□□□□□ -0.42
TOMM40O96008 KRT18P3-201ENST00000451602 1288 ntBASIC12.4□□□□□ -0.42
TOMM40O96008 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC12.4□□□□□ -0.42
TOMM40O96008 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC12.4□□□□□ -0.42
TOMM40O96008 RNA5SP410-201ENST00000516285 106 ntBASIC12.4□□□□□ -0.42
TOMM40O96008 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC12.4□□□□□ -0.42
TOMM40O96008 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC12.4□□□□□ -0.42
TOMM40O96008 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
TOMM40O96008 FAM197Y3-203ENST00000618346 717 ntBASIC12.4□□□□□ -0.42
TOMM40O96008 AC092865.6-201ENST00000642101 219 ntBASIC12.4□□□□□ -0.42
TOMM40O96008 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC12.4□□□□□ -0.42
TOMM40O96008 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC12.4□□□□□ -0.42
TOMM40O96008 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
TOMM40O96008 FOXO1B-201ENST00000504678 1527 ntBASIC12.4□□□□□ -0.42
TOMM40O96008 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TOMM40O96008 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
TOMM40O96008 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TOMM40O96008 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC12.4□□□□□ -0.42
TOMM40O96008 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
TOMM40O96008 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TOMM40O96008 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
TOMM40O96008 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC12.4□□□□□ -0.42
TOMM40O96008 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TOMM40O96008 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
TOMM40O96008 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
TOMM40O96008 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
TOMM40O96008 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC12.4□□□□□ -0.42
TOMM40O96008 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
TOMM40O96008 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
TOMM40O96008 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC12.4□□□□□ -0.43
TOMM40O96008 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TOMM40O96008 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TOMM40O96008 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
TOMM40O96008 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC12.39□□□□□ -0.43
TOMM40O96008 BNIP3P1-202ENST00000550043 1585 ntBASIC12.39□□□□□ -0.43
TOMM40O96008 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC12.39□□□□□ -0.43
TOMM40O96008 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC12.39□□□□□ -0.43
TOMM40O96008 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
TOMM40O96008 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TOMM40O96008 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TOMM40O96008 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TOMM40O96008 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC12.39□□□□□ -0.43
TOMM40O96008 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TOMM40O96008 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TOMM40O96008 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TOMM40O96008 ARHGAP23P1-201ENST00000562773 1937 ntBASIC12.39□□□□□ -0.43
TOMM40O96008 AC090616.6-203ENST00000579186 1945 ntBASIC12.39□□□□□ -0.43
TOMM40O96008 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TOMM40O96008 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC12.39□□□□□ -0.43
TOMM40O96008 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC12.39□□□□□ -0.43
TOMM40O96008 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC12.39□□□□□ -0.43
TOMM40O96008 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TOMM40O96008 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TOMM40O96008 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
TOMM40O96008 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TOMM40O96008 FAM220BP-201ENST00000377689 816 ntBASIC12.39□□□□□ -0.43
TOMM40O96008 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TOMM40O96008 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
TOMM40O96008 AC142381.1-201ENST00000426099 345 ntBASIC12.39□□□□□ -0.43
TOMM40O96008 RPS8P6-201ENST00000426177 609 ntBASIC12.39□□□□□ -0.43
TOMM40O96008 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TOMM40O96008 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC12.39□□□□□ -0.43
TOMM40O96008 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC12.39□□□□□ -0.43
TOMM40O96008 AC140113.2-201ENST00000604370 208 ntBASIC12.39□□□□□ -0.43
TOMM40O96008 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC12.39□□□□□ -0.43
TOMM40O96008 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC12.39□□□□□ -0.43
TOMM40O96008 AC091812.2-201ENST00000619081 385 ntBASIC12.39□□□□□ -0.43
TOMM40O96008 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
TOMM40O96008 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
TOMM40O96008 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms