Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC17.62■□□□□ 0.41
GGPS1O95749 WNT11-204ENST00000621122 789 ntTSL 5 BASIC17.62■□□□□ 0.41
GGPS1O95749 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC17.62■□□□□ 0.41
GGPS1O95749 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC17.62■□□□□ 0.41
GGPS1O95749 COX11-210ENST00000639671 696 ntBASIC17.62■□□□□ 0.41
GGPS1O95749 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GGPS1O95749 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GGPS1O95749 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GGPS1O95749 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GGPS1O95749 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.62■□□□□ 0.41
GGPS1O95749 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GGPS1O95749 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
GGPS1O95749 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
GGPS1O95749 TK1-203ENST00000588734 1681 ntTSL 2 BASIC17.61■□□□□ 0.41
GGPS1O95749 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
GGPS1O95749 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
GGPS1O95749 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
GGPS1O95749 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GGPS1O95749 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
GGPS1O95749 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GGPS1O95749 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GGPS1O95749 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.61■□□□□ 0.41
GGPS1O95749 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
GGPS1O95749 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.61■□□□□ 0.41
GGPS1O95749 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
GGPS1O95749 AL365203.3-201ENST00000609742 2057 ntBASIC17.61■□□□□ 0.41
GGPS1O95749 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GGPS1O95749 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GGPS1O95749 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC17.61■□□□□ 0.41
GGPS1O95749 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
GGPS1O95749 KRT223P-202ENST00000449164 1292 ntBASIC17.61■□□□□ 0.41
GGPS1O95749 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
GGPS1O95749 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
GGPS1O95749 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC17.61■□□□□ 0.41
GGPS1O95749 AC068587.3-201ENST00000526613 355 ntBASIC17.61■□□□□ 0.41
GGPS1O95749 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC17.61■□□□□ 0.41
GGPS1O95749 AP005482.1-201ENST00000563722 1273 ntBASIC17.61■□□□□ 0.41
GGPS1O95749 CLUHP6-201ENST00000580789 941 ntBASIC17.61■□□□□ 0.41
GGPS1O95749 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC17.61■□□□□ 0.41
GGPS1O95749 AC133552.6-201ENST00000613406 534 ntBASIC17.61■□□□□ 0.41
GGPS1O95749 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC17.61■□□□□ 0.41
GGPS1O95749 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GGPS1O95749 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
GGPS1O95749 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GGPS1O95749 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC17.61■□□□□ 0.41
GGPS1O95749 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
GGPS1O95749 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GGPS1O95749 AMT-233ENST00000636522 1620 ntTSL 2 BASIC17.61■□□□□ 0.41
GGPS1O95749 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
GGPS1O95749 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
GGPS1O95749 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC17.61■□□□□ 0.41
GGPS1O95749 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GGPS1O95749 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.61■□□□□ 0.41
GGPS1O95749 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
GGPS1O95749 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
GGPS1O95749 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
GGPS1O95749 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
GGPS1O95749 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
GGPS1O95749 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
GGPS1O95749 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GGPS1O95749 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.6■□□□□ 0.41
GGPS1O95749 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GGPS1O95749 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GGPS1O95749 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
GGPS1O95749 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
GGPS1O95749 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
GGPS1O95749 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC17.6■□□□□ 0.41
GGPS1O95749 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
GGPS1O95749 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
GGPS1O95749 RPL28-203ENST00000428193 573 ntTSL 2 BASIC17.6■□□□□ 0.41
GGPS1O95749 RPL28-204ENST00000431533 590 ntTSL 2 BASIC17.6■□□□□ 0.41
GGPS1O95749 BCRP2-202ENST00000447763 634 ntBASIC17.6■□□□□ 0.41
GGPS1O95749 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC17.6■□□□□ 0.41
GGPS1O95749 BCRP6-201ENST00000510112 632 ntBASIC17.6■□□□□ 0.41
GGPS1O95749 BCRP7-201ENST00000511549 544 ntBASIC17.6■□□□□ 0.41
GGPS1O95749 AC104989.1-201ENST00000519711 778 ntBASIC17.6■□□□□ 0.41
GGPS1O95749 PTP4A1P2-201ENST00000546033 454 ntBASIC17.6■□□□□ 0.41
GGPS1O95749 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
GGPS1O95749 RPL28-206ENST00000558752 671 ntTSL 3 BASIC17.6■□□□□ 0.41
GGPS1O95749 RPL28-207ENST00000558815 616 ntTSL 2 BASIC17.6■□□□□ 0.41
GGPS1O95749 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC17.6■□□□□ 0.41
GGPS1O95749 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
GGPS1O95749 AL022328.1-201ENST00000610050 478 ntBASIC17.6■□□□□ 0.41
GGPS1O95749 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC17.6■□□□□ 0.41
GGPS1O95749 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC17.6■□□□□ 0.41
GGPS1O95749 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GGPS1O95749 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
GGPS1O95749 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GGPS1O95749 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
GGPS1O95749 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.6■□□□□ 0.41
GGPS1O95749 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GGPS1O95749 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
GGPS1O95749 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GGPS1O95749 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.6■□□□□ 0.41
GGPS1O95749 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GGPS1O95749 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GGPS1O95749 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
GGPS1O95749 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GGPS1O95749 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.59■□□□□ 0.41
GGPS1O95749 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms