Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.49■□□□□ 0.07
CPNE6O95741 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE6O95741 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.49■□□□□ 0.07
CPNE6O95741 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE6O95741 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE6O95741 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.49■□□□□ 0.07
CPNE6O95741 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
CPNE6O95741 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CPNE6O95741 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC15.49■□□□□ 0.07
CPNE6O95741 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
CPNE6O95741 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.49■□□□□ 0.07
CPNE6O95741 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC15.49■□□□□ 0.07
CPNE6O95741 INE1-201ENST00000456273 945 ntBASIC15.49■□□□□ 0.07
CPNE6O95741 GIMAP3P-201ENST00000495150 836 ntBASIC15.49■□□□□ 0.07
CPNE6O95741 MEIS3P1-201ENST00000495167 958 ntBASIC15.49■□□□□ 0.07
CPNE6O95741 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC15.49■□□□□ 0.07
CPNE6O95741 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE6O95741 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.49■□□□□ 0.07
CPNE6O95741 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.49■□□□□ 0.07
CPNE6O95741 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC15.49■□□□□ 0.07
CPNE6O95741 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC15.49■□□□□ 0.07
CPNE6O95741 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC15.49■□□□□ 0.07
CPNE6O95741 AL008721.1-201ENST00000609964 604 ntBASIC15.49■□□□□ 0.07
CPNE6O95741 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE6O95741 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.49■□□□□ 0.07
CPNE6O95741 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE6O95741 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.49■□□□□ 0.07
CPNE6O95741 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE6O95741 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE6O95741 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
CPNE6O95741 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE6O95741 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE6O95741 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE6O95741 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CPNE6O95741 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
CPNE6O95741 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.49■□□□□ 0.07
CPNE6O95741 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CPNE6O95741 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE6O95741 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.49■□□□□ 0.07
CPNE6O95741 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CPNE6O95741 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.49■□□□□ 0.07
CPNE6O95741 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE6O95741 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE6O95741 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE6O95741 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
CPNE6O95741 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE6O95741 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.48■□□□□ 0.07
CPNE6O95741 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.48■□□□□ 0.07
CPNE6O95741 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE6O95741 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE6O95741 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.48■□□□□ 0.07
CPNE6O95741 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.48■□□□□ 0.07
CPNE6O95741 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
CPNE6O95741 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE6O95741 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE6O95741 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.48■□□□□ 0.07
CPNE6O95741 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.48■□□□□ 0.07
CPNE6O95741 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE6O95741 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE6O95741 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CPNE6O95741 AL512384.1-201ENST00000406683 331 ntBASIC15.48■□□□□ 0.07
CPNE6O95741 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC15.48■□□□□ 0.07
CPNE6O95741 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.48■□□□□ 0.07
CPNE6O95741 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.48■□□□□ 0.07
CPNE6O95741 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC15.48■□□□□ 0.07
CPNE6O95741 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.48■□□□□ 0.07
CPNE6O95741 FTH1-202ENST00000526640 786 ntTSL 2 BASIC15.48■□□□□ 0.07
CPNE6O95741 TIMM17BP1-201ENST00000545713 516 ntBASIC15.48■□□□□ 0.07
CPNE6O95741 NOP2-220ENST00000545915 630 ntTSL 2 BASIC15.48■□□□□ 0.07
CPNE6O95741 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CPNE6O95741 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
CPNE6O95741 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
CPNE6O95741 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.48■□□□□ 0.07
CPNE6O95741 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.48■□□□□ 0.07
CPNE6O95741 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.48■□□□□ 0.07
CPNE6O95741 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.48■□□□□ 0.07
CPNE6O95741 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC15.48■□□□□ 0.07
CPNE6O95741 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC15.48■□□□□ 0.07
CPNE6O95741 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE6O95741 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE6O95741 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE6O95741 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE6O95741 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CPNE6O95741 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE6O95741 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE6O95741 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE6O95741 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE6O95741 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE6O95741 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE6O95741 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE6O95741 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CPNE6O95741 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.48■□□□□ 0.07
CPNE6O95741 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.48■□□□□ 0.07
CPNE6O95741 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CPNE6O95741 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CPNE6O95741 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
CPNE6O95741 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.47■□□□□ 0.07
CPNE6O95741 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CPNE6O95741 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.47■□□□□ 0.07
CPNE6O95741 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms