Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.51□□□□□ -0.09
NKX2-2O95096 AC004890.2-204ENST00000481968 304 ntBASIC14.51□□□□□ -0.09
NKX2-2O95096 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.51□□□□□ -0.09
NKX2-2O95096 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.51□□□□□ -0.09
NKX2-2O95096 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.51□□□□□ -0.09
NKX2-2O95096 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
NKX2-2O95096 AC092337.1-201ENST00000568699 1129 ntBASIC14.51□□□□□ -0.09
NKX2-2O95096 AC009407.1-201ENST00000568958 598 ntBASIC14.51□□□□□ -0.09
NKX2-2O95096 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.51□□□□□ -0.09
NKX2-2O95096 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.51□□□□□ -0.09
NKX2-2O95096 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.51□□□□□ -0.09
NKX2-2O95096 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
NKX2-2O95096 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NKX2-2O95096 AC138035.3-201ENST00000622706 2791 ntBASIC14.51□□□□□ -0.09
NKX2-2O95096 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
NKX2-2O95096 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NKX2-2O95096 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.51□□□□□ -0.09
NKX2-2O95096 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NKX2-2O95096 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.51□□□□□ -0.09
NKX2-2O95096 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NKX2-2O95096 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.51□□□□□ -0.09
NKX2-2O95096 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NKX2-2O95096 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
NKX2-2O95096 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.51□□□□□ -0.09
NKX2-2O95096 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
NKX2-2O95096 AC126365.1-201ENST00000578585 1514 ntBASIC14.51□□□□□ -0.09
NKX2-2O95096 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NKX2-2O95096 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NKX2-2O95096 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.5□□□□□ -0.09
NKX2-2O95096 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NKX2-2O95096 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.5□□□□□ -0.09
NKX2-2O95096 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.5□□□□□ -0.09
NKX2-2O95096 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.5□□□□□ -0.09
NKX2-2O95096 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NKX2-2O95096 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NKX2-2O95096 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
NKX2-2O95096 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
NKX2-2O95096 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
NKX2-2O95096 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
NKX2-2O95096 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.5□□□□□ -0.09
NKX2-2O95096 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NKX2-2O95096 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
NKX2-2O95096 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
NKX2-2O95096 AC023157.3-201ENST00000619086 2088 ntBASIC14.5□□□□□ -0.09
NKX2-2O95096 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
NKX2-2O95096 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NKX2-2O95096 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NKX2-2O95096 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
NKX2-2O95096 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.5□□□□□ -0.09
NKX2-2O95096 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.5□□□□□ -0.09
NKX2-2O95096 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.5□□□□□ -0.09
NKX2-2O95096 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.5□□□□□ -0.09
NKX2-2O95096 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NKX2-2O95096 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
NKX2-2O95096 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.5□□□□□ -0.09
NKX2-2O95096 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.5□□□□□ -0.09
NKX2-2O95096 ORC5-208ENST00000626700 344 ntTSL 3 BASIC14.5□□□□□ -0.09
NKX2-2O95096 AC004461.2-201ENST00000629517 803 ntBASIC14.5□□□□□ -0.09
NKX2-2O95096 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
NKX2-2O95096 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NKX2-2O95096 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.5□□□□□ -0.09
NKX2-2O95096 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.5□□□□□ -0.09
NKX2-2O95096 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
NKX2-2O95096 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NKX2-2O95096 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.5□□□□□ -0.09
NKX2-2O95096 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
NKX2-2O95096 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NKX2-2O95096 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NKX2-2O95096 AC138969.3-201ENST00000546612 1459 ntBASIC14.5□□□□□ -0.09
NKX2-2O95096 AC138932.2-201ENST00000548268 1459 ntBASIC14.5□□□□□ -0.09
NKX2-2O95096 AC126755.4-201ENST00000549796 1459 ntBASIC14.5□□□□□ -0.09
NKX2-2O95096 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
NKX2-2O95096 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.5□□□□□ -0.09
NKX2-2O95096 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
NKX2-2O95096 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.5□□□□□ -0.09
NKX2-2O95096 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NKX2-2O95096 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
NKX2-2O95096 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NKX2-2O95096 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NKX2-2O95096 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.49□□□□□ -0.09
NKX2-2O95096 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
NKX2-2O95096 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NKX2-2O95096 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NKX2-2O95096 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NKX2-2O95096 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NKX2-2O95096 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.49□□□□□ -0.09
NKX2-2O95096 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.49□□□□□ -0.09
NKX2-2O95096 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.49□□□□□ -0.09
NKX2-2O95096 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NKX2-2O95096 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.49□□□□□ -0.09
NKX2-2O95096 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NKX2-2O95096 AC022144.1-201ENST00000602255 1580 ntBASIC14.49□□□□□ -0.09
NKX2-2O95096 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
NKX2-2O95096 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.49□□□□□ -0.09
NKX2-2O95096 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.49□□□□□ -0.09
NKX2-2O95096 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.49□□□□□ -0.09
NKX2-2O95096 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.49□□□□□ -0.09
NKX2-2O95096 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.49□□□□□ -0.09
NKX2-2O95096 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.49□□□□□ -0.09
NKX2-2O95096 KRT18P43-201ENST00000469825 1281 ntBASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms