Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC6.84□□□□□ -1.31
USH2AO75445 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC6.84□□□□□ -1.31
USH2AO75445 AC084781.1-201ENST00000613737 656 ntBASIC6.84□□□□□ -1.31
USH2AO75445 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC6.84□□□□□ -1.31
USH2AO75445 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
USH2AO75445 ANKRD30BP2-201ENST00000435744 1610 ntBASIC6.84□□□□□ -1.31
USH2AO75445 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC6.84□□□□□ -1.31
USH2AO75445 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
USH2AO75445 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC6.84□□□□□ -1.31
USH2AO75445 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC6.84□□□□□ -1.31
USH2AO75445 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
USH2AO75445 CLUHP2-201ENST00000426660 1303 ntBASIC6.84□□□□□ -1.31
USH2AO75445 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC6.84□□□□□ -1.31
USH2AO75445 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
USH2AO75445 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
USH2AO75445 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
USH2AO75445 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
USH2AO75445 AL136309.1-201ENST00000403917 691 ntBASIC6.84□□□□□ -1.31
USH2AO75445 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC6.84□□□□□ -1.31
USH2AO75445 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC6.84□□□□□ -1.31
USH2AO75445 CR383656.3-201ENST00000551315 183 ntBASIC6.84□□□□□ -1.31
USH2AO75445 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC6.84□□□□□ -1.31
USH2AO75445 GOLGA2P7-209ENST00000560408 745 ntBASIC6.84□□□□□ -1.31
USH2AO75445 AC106820.3-201ENST00000561653 397 ntBASIC6.84□□□□□ -1.31
USH2AO75445 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
USH2AO75445 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
USH2AO75445 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
USH2AO75445 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
USH2AO75445 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC6.84□□□□□ -1.31
USH2AO75445 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
USH2AO75445 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
USH2AO75445 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC6.84□□□□□ -1.32
USH2AO75445 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
USH2AO75445 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
USH2AO75445 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
USH2AO75445 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.32
USH2AO75445 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
USH2AO75445 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC6.84□□□□□ -1.32
USH2AO75445 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC6.84□□□□□ -1.32
USH2AO75445 AC026320.2-201ENST00000434379 478 ntBASIC6.83□□□□□ -1.32
USH2AO75445 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
USH2AO75445 AC004837.1-201ENST00000446267 564 ntBASIC6.83□□□□□ -1.32
USH2AO75445 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC6.83□□□□□ -1.32
USH2AO75445 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC6.83□□□□□ -1.32
USH2AO75445 EMC4-208ENST00000559078 599 ntTSL 3 BASIC6.83□□□□□ -1.32
USH2AO75445 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC6.83□□□□□ -1.32
USH2AO75445 AC009560.1-201ENST00000620208 434 ntBASIC6.83□□□□□ -1.32
USH2AO75445 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
USH2AO75445 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
USH2AO75445 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
USH2AO75445 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC6.83□□□□□ -1.32
USH2AO75445 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC6.83□□□□□ -1.32
USH2AO75445 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC6.83□□□□□ -1.32
USH2AO75445 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC6.83□□□□□ -1.32
USH2AO75445 AC009093.2-202ENST00000620513 2079 ntBASIC6.83□□□□□ -1.32
USH2AO75445 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
USH2AO75445 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
USH2AO75445 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
USH2AO75445 HIST2H2BA-201ENST00000412169 381 ntBASIC6.83□□□□□ -1.32
USH2AO75445 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
USH2AO75445 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC6.83□□□□□ -1.32
USH2AO75445 AC010900.1-201ENST00000449849 1296 ntBASIC6.83□□□□□ -1.32
USH2AO75445 GDNF-207ENST00000515058 764 ntTSL 5 BASIC6.83□□□□□ -1.32
USH2AO75445 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC6.83□□□□□ -1.32
USH2AO75445 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC6.83□□□□□ -1.32
USH2AO75445 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC6.83□□□□□ -1.32
USH2AO75445 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
USH2AO75445 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
USH2AO75445 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
USH2AO75445 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC6.83□□□□□ -1.32
USH2AO75445 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC6.83□□□□□ -1.32
USH2AO75445 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
USH2AO75445 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
USH2AO75445 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC6.83□□□□□ -1.32
USH2AO75445 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
USH2AO75445 POLL-217ENST00000628479 1953 ntTSL 5 BASIC6.83□□□□□ -1.32
USH2AO75445 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC6.83□□□□□ -1.32
USH2AO75445 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
USH2AO75445 AL662844.4-201ENST00000606367 2838 ntBASIC6.83□□□□□ -1.32
USH2AO75445 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
USH2AO75445 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
USH2AO75445 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
USH2AO75445 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC6.83□□□□□ -1.32
USH2AO75445 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC6.83□□□□□ -1.32
USH2AO75445 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
USH2AO75445 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
USH2AO75445 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC6.83□□□□□ -1.32
USH2AO75445 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
USH2AO75445 AC084752.1-201ENST00000509766 622 ntBASIC6.83□□□□□ -1.32
USH2AO75445 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC6.83□□□□□ -1.32
USH2AO75445 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
USH2AO75445 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
USH2AO75445 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
USH2AO75445 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
USH2AO75445 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
USH2AO75445 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
USH2AO75445 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
USH2AO75445 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
USH2AO75445 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
USH2AO75445 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms