Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.11■□□□□ 0.33
RNF40O75150 AL031055.1-201ENST00000606362 631 ntBASIC17.11■□□□□ 0.33
RNF40O75150 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
RNF40O75150 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF40O75150 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
RNF40O75150 REXO1L8P-201ENST00000604378 1897 ntBASIC17.11■□□□□ 0.33
RNF40O75150 BANP-203ENST00000393207 2438 ntTSL 2 BASIC17.11■□□□□ 0.33
RNF40O75150 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF40O75150 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
RNF40O75150 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF40O75150 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC17.11■□□□□ 0.33
RNF40O75150 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
RNF40O75150 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
RNF40O75150 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC17.11■□□□□ 0.33
RNF40O75150 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF40O75150 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF40O75150 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RNF40O75150 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF40O75150 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF40O75150 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF40O75150 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
RNF40O75150 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF40O75150 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RNF40O75150 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.1■□□□□ 0.33
RNF40O75150 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC17.1■□□□□ 0.33
RNF40O75150 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF40O75150 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
RNF40O75150 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF40O75150 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RNF40O75150 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RNF40O75150 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF40O75150 AC007292.2-201ENST00000593524 1812 ntBASIC17.1■□□□□ 0.33
RNF40O75150 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RNF40O75150 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF40O75150 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
RNF40O75150 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC17.1■□□□□ 0.33
RNF40O75150 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RNF40O75150 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
RNF40O75150 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RNF40O75150 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF40O75150 COPE-202ENST00000349893 948 ntTSL 2 BASIC17.1■□□□□ 0.33
RNF40O75150 RNU1-129P-201ENST00000384064 167 ntBASIC17.1■□□□□ 0.33
RNF40O75150 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
RNF40O75150 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC17.1■□□□□ 0.33
RNF40O75150 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC17.1■□□□□ 0.33
RNF40O75150 U1.21-201ENST00000580816 167 ntBASIC17.1■□□□□ 0.33
RNF40O75150 AL158211.3-201ENST00000607385 239 ntBASIC17.1■□□□□ 0.33
RNF40O75150 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.1■□□□□ 0.33
RNF40O75150 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
RNF40O75150 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.1■□□□□ 0.33
RNF40O75150 AL139011.1-202ENST00000642063 584 ntBASIC17.1■□□□□ 0.33
RNF40O75150 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF40O75150 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC17.1■□□□□ 0.33
RNF40O75150 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC17.1■□□□□ 0.33
RNF40O75150 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF40O75150 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF40O75150 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RNF40O75150 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF40O75150 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RNF40O75150 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF40O75150 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RNF40O75150 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RNF40O75150 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF40O75150 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF40O75150 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RNF40O75150 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC17.1■□□□□ 0.33
RNF40O75150 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF40O75150 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
RNF40O75150 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC17.09■□□□□ 0.33
RNF40O75150 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF40O75150 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.09■□□□□ 0.33
RNF40O75150 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF40O75150 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF40O75150 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC17.09■□□□□ 0.33
RNF40O75150 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC17.09■□□□□ 0.33
RNF40O75150 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF40O75150 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
RNF40O75150 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF40O75150 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF40O75150 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF40O75150 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
RNF40O75150 RAC2-204ENST00000406508 893 ntTSL 5 BASIC17.09■□□□□ 0.33
RNF40O75150 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC17.09■□□□□ 0.33
RNF40O75150 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.09■□□□□ 0.33
RNF40O75150 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC17.09■□□□□ 0.33
RNF40O75150 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.09■□□□□ 0.33
RNF40O75150 AL512638.1-201ENST00000457493 794 ntBASIC17.09■□□□□ 0.33
RNF40O75150 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC17.09■□□□□ 0.33
RNF40O75150 AC069120.2-201ENST00000524091 540 ntBASIC17.09■□□□□ 0.33
RNF40O75150 ALG1L8P-201ENST00000533887 760 ntBASIC17.09■□□□□ 0.33
RNF40O75150 AC132872.1-201ENST00000566986 1195 ntBASIC17.09■□□□□ 0.33
RNF40O75150 AP000842.3-202ENST00000569238 1080 ntBASIC17.09■□□□□ 0.33
RNF40O75150 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
RNF40O75150 AC027307.2-201ENST00000591252 911 ntBASIC17.09■□□□□ 0.33
RNF40O75150 AC008267.7-201ENST00000624570 1194 ntBASIC17.09■□□□□ 0.33
RNF40O75150 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
RNF40O75150 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF40O75150 AC067930.6-201ENST00000623257 4947 ntBASIC17.09■□□□□ 0.33
RNF40O75150 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.09■□□□□ 0.33
RNF40O75150 AC069224.1-201ENST00000566372 1715 ntBASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms