Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
RIPK2O43353 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RIPK2O43353 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RIPK2O43353 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
RIPK2O43353 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
RIPK2O43353 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
RIPK2O43353 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
RIPK2O43353 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
RIPK2O43353 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RIPK2O43353 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
RIPK2O43353 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RIPK2O43353 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC16.02■□□□□ 0.15
RIPK2O43353 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RIPK2O43353 KRT8P37-201ENST00000451609 1420 ntBASIC16.02■□□□□ 0.15
RIPK2O43353 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
RIPK2O43353 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
RIPK2O43353 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
RIPK2O43353 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.01■□□□□ 0.15
RIPK2O43353 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
RIPK2O43353 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
RIPK2O43353 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
RIPK2O43353 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RIPK2O43353 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RIPK2O43353 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
RIPK2O43353 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC16.01■□□□□ 0.15
RIPK2O43353 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC16.01■□□□□ 0.15
RIPK2O43353 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.01■□□□□ 0.15
RIPK2O43353 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.01■□□□□ 0.15
RIPK2O43353 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
RIPK2O43353 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RIPK2O43353 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RIPK2O43353 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RIPK2O43353 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RIPK2O43353 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RIPK2O43353 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.01■□□□□ 0.15
RIPK2O43353 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
RIPK2O43353 HNRNPUP1-201ENST00000554987 333 ntBASIC16.01■□□□□ 0.15
RIPK2O43353 AL049840.3-201ENST00000602669 611 ntBASIC16.01■□□□□ 0.15
RIPK2O43353 AC097359.3-201ENST00000603982 1210 ntBASIC16.01■□□□□ 0.15
RIPK2O43353 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC16.01■□□□□ 0.15
RIPK2O43353 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RIPK2O43353 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
RIPK2O43353 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RIPK2O43353 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.01■□□□□ 0.15
RIPK2O43353 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC16.01■□□□□ 0.15
RIPK2O43353 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
RIPK2O43353 AC025580.3-201ENST00000617932 1424 ntBASIC16.01■□□□□ 0.15
RIPK2O43353 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.01■□□□□ 0.15
RIPK2O43353 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
RIPK2O43353 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
RIPK2O43353 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RIPK2O43353 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
RIPK2O43353 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
RIPK2O43353 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RIPK2O43353 AC005840.4-201ENST00000541242 2494 ntBASIC16.01■□□□□ 0.15
RIPK2O43353 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RIPK2O43353 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
RIPK2O43353 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC16.01■□□□□ 0.15
RIPK2O43353 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
RIPK2O43353 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RIPK2O43353 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RIPK2O43353 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
RIPK2O43353 PCDHGB8P-201ENST00000502926 1973 ntBASIC16■□□□□ 0.15
RIPK2O43353 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16■□□□□ 0.15
RIPK2O43353 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
RIPK2O43353 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
RIPK2O43353 POLL-206ENST00000370172 2308 ntTSL 2 BASIC16■□□□□ 0.15
RIPK2O43353 AC041040.2-201ENST00000622926 2899 ntBASIC16■□□□□ 0.15
RIPK2O43353 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC16■□□□□ 0.15
RIPK2O43353 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16■□□□□ 0.15
RIPK2O43353 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC16■□□□□ 0.15
RIPK2O43353 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RIPK2O43353 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16■□□□□ 0.15
RIPK2O43353 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
RIPK2O43353 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
RIPK2O43353 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RIPK2O43353 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
RIPK2O43353 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RIPK2O43353 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
RIPK2O43353 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16■□□□□ 0.15
RIPK2O43353 EEF1DP4-201ENST00000446006 880 ntBASIC16■□□□□ 0.15
RIPK2O43353 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16■□□□□ 0.15
RIPK2O43353 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16■□□□□ 0.15
RIPK2O43353 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
RIPK2O43353 MIR7706-201ENST00000613747 67 ntBASIC16■□□□□ 0.15
RIPK2O43353 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16■□□□□ 0.15
RIPK2O43353 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16■□□□□ 0.15
RIPK2O43353 AC117489.1-201ENST00000625169 3217 ntBASIC16■□□□□ 0.15
RIPK2O43353 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RIPK2O43353 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
RIPK2O43353 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC16■□□□□ 0.15
RIPK2O43353 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC16■□□□□ 0.15
RIPK2O43353 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
RIPK2O43353 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
RIPK2O43353 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC16■□□□□ 0.15
RIPK2O43353 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RIPK2O43353 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
RIPK2O43353 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RIPK2O43353 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC16■□□□□ 0.15
RIPK2O43353 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms