Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TNRC18O15417 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC16.5■□□□□ 0.23
TNRC18O15417 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC16.5■□□□□ 0.23
TNRC18O15417 AC004466.1-201ENST00000599515 1080 ntBASIC16.5■□□□□ 0.23
TNRC18O15417 AC008972.2-201ENST00000606587 494 ntBASIC16.5■□□□□ 0.23
TNRC18O15417 AC012508.2-201ENST00000567613 1472 ntBASIC16.5■□□□□ 0.23
TNRC18O15417 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.5■□□□□ 0.23
TNRC18O15417 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TNRC18O15417 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TNRC18O15417 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TNRC18O15417 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.5■□□□□ 0.23
TNRC18O15417 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC16.5■□□□□ 0.23
TNRC18O15417 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
TNRC18O15417 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TNRC18O15417 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TNRC18O15417 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC16.5■□□□□ 0.23
TNRC18O15417 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
TNRC18O15417 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TNRC18O15417 RAN-210ENST00000541630 1475 ntTSL 2 BASIC16.5■□□□□ 0.23
TNRC18O15417 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC16.5■□□□□ 0.23
TNRC18O15417 TMA16-204ENST00000508268 608 ntTSL 2 BASIC16.5■□□□□ 0.23
TNRC18O15417 ANAPC11-214ENST00000578544 403 ntTSL 3 BASIC16.5■□□□□ 0.23
TNRC18O15417 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.5■□□□□ 0.23
TNRC18O15417 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
TNRC18O15417 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TNRC18O15417 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TNRC18O15417 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TNRC18O15417 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TNRC18O15417 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TNRC18O15417 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC16.5■□□□□ 0.23
TNRC18O15417 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC16.5■□□□□ 0.23
TNRC18O15417 AL162377.1-202ENST00000456688 1181 ntTSL 2 BASIC16.5■□□□□ 0.23
TNRC18O15417 RN7SL300P-201ENST00000582522 318 ntBASIC16.5■□□□□ 0.23
TNRC18O15417 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC16.5■□□□□ 0.23
TNRC18O15417 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TNRC18O15417 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TNRC18O15417 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TNRC18O15417 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
TNRC18O15417 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
TNRC18O15417 THAP4-203ENST00000402545 833 ntTSL 5 BASIC16.49■□□□□ 0.23
TNRC18O15417 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC16.49■□□□□ 0.23
TNRC18O15417 AL451000.1-201ENST00000451300 1186 ntBASIC16.49■□□□□ 0.23
TNRC18O15417 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC16.49■□□□□ 0.23
TNRC18O15417 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC16.49■□□□□ 0.23
TNRC18O15417 AC068867.1-201ENST00000559855 150 ntBASIC16.49■□□□□ 0.23
TNRC18O15417 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TNRC18O15417 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.49■□□□□ 0.23
TNRC18O15417 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TNRC18O15417 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.49■□□□□ 0.23
TNRC18O15417 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TNRC18O15417 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.49■□□□□ 0.23
TNRC18O15417 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.49■□□□□ 0.23
TNRC18O15417 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC16.49■□□□□ 0.23
TNRC18O15417 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC16.49■□□□□ 0.23
TNRC18O15417 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TNRC18O15417 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC16.49■□□□□ 0.23
TNRC18O15417 GOLGA2P7-209ENST00000560408 745 ntBASIC16.49■□□□□ 0.23
TNRC18O15417 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TNRC18O15417 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TNRC18O15417 RBFOX1-214ENST00000552089 1430 ntTSL 5 BASIC16.48■□□□□ 0.23
TNRC18O15417 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TNRC18O15417 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TNRC18O15417 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TNRC18O15417 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TNRC18O15417 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TNRC18O15417 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TNRC18O15417 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TNRC18O15417 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TNRC18O15417 PPIA-208ENST00000489459 907 ntTSL 2 BASIC16.48■□□□□ 0.23
TNRC18O15417 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC16.48■□□□□ 0.23
TNRC18O15417 AC068831.5-201ENST00000557387 328 ntBASIC16.48■□□□□ 0.23
TNRC18O15417 LINC01029-202ENST00000578833 366 ntTSL 3 BASIC16.48■□□□□ 0.23
TNRC18O15417 PPIA-210ENST00000620047 827 ntTSL 5 BASIC16.48■□□□□ 0.23
TNRC18O15417 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC16.48■□□□□ 0.23
TNRC18O15417 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TNRC18O15417 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.48■□□□□ 0.23
TNRC18O15417 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TNRC18O15417 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC16.48■□□□□ 0.23
TNRC18O15417 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
TNRC18O15417 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TNRC18O15417 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC16.48■□□□□ 0.23
TNRC18O15417 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TNRC18O15417 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.48■□□□□ 0.23
TNRC18O15417 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.48■□□□□ 0.23
TNRC18O15417 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TNRC18O15417 AL356000.1-201ENST00000441073 1238 ntBASIC16.48■□□□□ 0.23
TNRC18O15417 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC16.48■□□□□ 0.23
TNRC18O15417 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC16.48■□□□□ 0.23
TNRC18O15417 AC093510.1-202ENST00000546238 442 ntTSL 3 BASIC16.48■□□□□ 0.23
TNRC18O15417 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC16.48■□□□□ 0.23
TNRC18O15417 AC006547.1-209ENST00000596334 996 ntTSL 5 BASIC16.48■□□□□ 0.23
TNRC18O15417 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
TNRC18O15417 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
TNRC18O15417 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
TNRC18O15417 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
TNRC18O15417 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.48■□□□□ 0.23
TNRC18O15417 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
TNRC18O15417 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TNRC18O15417 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TNRC18O15417 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms