Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
O00370 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
O00370 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
O00370 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
O00370 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
O00370 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
O00370 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
O00370 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
O00370 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
O00370 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.81■□□□□ 0.28
O00370 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.81■□□□□ 0.28
O00370 BASP1P1-201ENST00000430708 665 ntBASIC16.81■□□□□ 0.28
O00370 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.81■□□□□ 0.28
O00370 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
O00370 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.81■□□□□ 0.28
O00370 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
O00370 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.81■□□□□ 0.28
O00370 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.81■□□□□ 0.28
O00370 AC044860.1-202ENST00000559481 777 ntBASIC16.81■□□□□ 0.28
O00370 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.81■□□□□ 0.28
O00370 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.81■□□□□ 0.28
O00370 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
O00370 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
O00370 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
O00370 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
O00370 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
O00370 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
O00370 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
O00370 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.81■□□□□ 0.28
O00370 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
O00370 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
O00370 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.81■□□□□ 0.28
O00370 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.81■□□□□ 0.28
O00370 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.8■□□□□ 0.28
O00370 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
O00370 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
O00370 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
O00370 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
O00370 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
O00370 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.8■□□□□ 0.28
O00370 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
O00370 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
O00370 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
O00370 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.8■□□□□ 0.28
O00370 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
O00370 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
O00370 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
O00370 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
O00370 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
O00370 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.8■□□□□ 0.28
O00370 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.8■□□□□ 0.28
O00370 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
O00370 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.8■□□□□ 0.28
O00370 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
O00370 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
O00370 MIR770-201ENST00000390219 98 ntBASIC16.8■□□□□ 0.28
O00370 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.8■□□□□ 0.28
O00370 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
O00370 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.8■□□□□ 0.28
O00370 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.8■□□□□ 0.28
O00370 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.8■□□□□ 0.28
O00370 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
O00370 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.8■□□□□ 0.28
O00370 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.8■□□□□ 0.28
O00370 AL109936.8-201ENST00000641772 604 ntBASIC16.8■□□□□ 0.28
O00370 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
O00370 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
O00370 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
O00370 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.8■□□□□ 0.28
O00370 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.8■□□□□ 0.28
O00370 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.8■□□□□ 0.28
O00370 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
O00370 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
O00370 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
O00370 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
O00370 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.8■□□□□ 0.28
O00370 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
O00370 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
O00370 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
O00370 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.79■□□□□ 0.28
O00370 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
O00370 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.79■□□□□ 0.28
O00370 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
O00370 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.79■□□□□ 0.28
O00370 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.79■□□□□ 0.28
O00370 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.79■□□□□ 0.28
O00370 MRPS18AP1-201ENST00000414458 589 ntBASIC16.79■□□□□ 0.28
O00370 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.79■□□□□ 0.28
O00370 SDHAP3-202ENST00000515467 728 ntBASIC16.79■□□□□ 0.28
O00370 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
O00370 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.79■□□□□ 0.28
O00370 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
O00370 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
O00370 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
O00370 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
O00370 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.79■□□□□ 0.28
O00370 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.79■□□□□ 0.28
O00370 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.79■□□□□ 0.28
O00370 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.79■□□□□ 0.28
O00370 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms