Protein–RNA interactions for Protein: O00221

NFKBIE, NF-kappa-B inhibitor epsilon, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKBIEO00221 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NFKBIEO00221 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NFKBIEO00221 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
NFKBIEO00221 AC018695.7-201ENST00000624587 2492 ntBASIC18.61■□□□□ 0.57
NFKBIEO00221 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
NFKBIEO00221 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NFKBIEO00221 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
NFKBIEO00221 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC18.61■□□□□ 0.57
NFKBIEO00221 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
NFKBIEO00221 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
NFKBIEO00221 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
NFKBIEO00221 RN7SKP214-201ENST00000364208 315 ntBASIC18.61■□□□□ 0.57
NFKBIEO00221 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
NFKBIEO00221 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
NFKBIEO00221 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC18.61■□□□□ 0.57
NFKBIEO00221 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
NFKBIEO00221 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
NFKBIEO00221 DNAJB1P1-201ENST00000429417 1024 ntBASIC18.61■□□□□ 0.57
NFKBIEO00221 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC18.61■□□□□ 0.57
NFKBIEO00221 CTBP2P4-201ENST00000513884 920 ntBASIC18.61■□□□□ 0.57
NFKBIEO00221 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC18.61■□□□□ 0.57
NFKBIEO00221 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC18.61■□□□□ 0.57
NFKBIEO00221 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NFKBIEO00221 SNORD3B-2-202ENST00000571722 791 ntBASIC18.61■□□□□ 0.57
NFKBIEO00221 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
NFKBIEO00221 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
NFKBIEO00221 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
NFKBIEO00221 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NFKBIEO00221 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
NFKBIEO00221 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NFKBIEO00221 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
NFKBIEO00221 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC18.6■□□□□ 0.57
NFKBIEO00221 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
NFKBIEO00221 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NFKBIEO00221 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NFKBIEO00221 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NFKBIEO00221 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NFKBIEO00221 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
NFKBIEO00221 FZD10-202ENST00000539839 3282 ntBASIC18.6■□□□□ 0.57
NFKBIEO00221 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NFKBIEO00221 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
NFKBIEO00221 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC18.6■□□□□ 0.57
NFKBIEO00221 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC18.6■□□□□ 0.57
NFKBIEO00221 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC18.6■□□□□ 0.57
NFKBIEO00221 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
NFKBIEO00221 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC18.6■□□□□ 0.57
NFKBIEO00221 AL358472.3-201ENST00000608147 415 ntBASIC18.6■□□□□ 0.57
NFKBIEO00221 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
NFKBIEO00221 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC18.6■□□□□ 0.57
NFKBIEO00221 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
NFKBIEO00221 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NFKBIEO00221 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC18.6■□□□□ 0.57
NFKBIEO00221 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
NFKBIEO00221 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
NFKBIEO00221 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NFKBIEO00221 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC18.6■□□□□ 0.57
NFKBIEO00221 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NFKBIEO00221 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NFKBIEO00221 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC18.59■□□□□ 0.57
NFKBIEO00221 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NFKBIEO00221 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
NFKBIEO00221 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
NFKBIEO00221 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NFKBIEO00221 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
NFKBIEO00221 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NFKBIEO00221 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NFKBIEO00221 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
NFKBIEO00221 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC18.59■□□□□ 0.57
NFKBIEO00221 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NFKBIEO00221 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NFKBIEO00221 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC18.59■□□□□ 0.57
NFKBIEO00221 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC18.59■□□□□ 0.57
NFKBIEO00221 RPL18P13-201ENST00000478088 569 ntBASIC18.59■□□□□ 0.57
NFKBIEO00221 MESTP3-201ENST00000503460 968 ntBASIC18.59■□□□□ 0.57
NFKBIEO00221 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NFKBIEO00221 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
NFKBIEO00221 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
NFKBIEO00221 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NFKBIEO00221 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NFKBIEO00221 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
NFKBIEO00221 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC18.59■□□□□ 0.57
NFKBIEO00221 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC18.59■□□□□ 0.57
NFKBIEO00221 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
NFKBIEO00221 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NFKBIEO00221 AC006449.6-201ENST00000612330 2296 ntBASIC18.59■□□□□ 0.57
NFKBIEO00221 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NFKBIEO00221 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
NFKBIEO00221 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NFKBIEO00221 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NFKBIEO00221 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
NFKBIEO00221 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
NFKBIEO00221 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC18.59■□□□□ 0.57
NFKBIEO00221 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NFKBIEO00221 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NFKBIEO00221 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NFKBIEO00221 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.59■□□□□ 0.57
NFKBIEO00221 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
NFKBIEO00221 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NFKBIEO00221 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NFKBIEO00221 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC18.58■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms