Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
DDX39AO00148 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.69■□□□□ 0.42
DDX39AO00148 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
DDX39AO00148 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC17.69■□□□□ 0.42
DDX39AO00148 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
DDX39AO00148 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
DDX39AO00148 AC098614.1-201ENST00000368528 745 ntBASIC17.69■□□□□ 0.42
DDX39AO00148 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
DDX39AO00148 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC17.69■□□□□ 0.42
DDX39AO00148 CMC2-214ENST00000565925 640 ntTSL 5 BASIC17.69■□□□□ 0.42
DDX39AO00148 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
DDX39AO00148 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
DDX39AO00148 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC17.69■□□□□ 0.42
DDX39AO00148 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
DDX39AO00148 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DDX39AO00148 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
DDX39AO00148 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC17.69■□□□□ 0.42
DDX39AO00148 AC092127.1-201ENST00000567093 3455 ntBASIC17.69■□□□□ 0.42
DDX39AO00148 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
DDX39AO00148 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
DDX39AO00148 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DDX39AO00148 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
DDX39AO00148 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DDX39AO00148 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
DDX39AO00148 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
DDX39AO00148 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
DDX39AO00148 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
DDX39AO00148 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DDX39AO00148 AL121723.1-201ENST00000445194 1519 ntBASIC17.68■□□□□ 0.42
DDX39AO00148 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
DDX39AO00148 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
DDX39AO00148 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
DDX39AO00148 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
DDX39AO00148 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC17.68■□□□□ 0.42
DDX39AO00148 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DDX39AO00148 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DDX39AO00148 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
DDX39AO00148 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DDX39AO00148 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
DDX39AO00148 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
DDX39AO00148 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
DDX39AO00148 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
DDX39AO00148 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC17.68■□□□□ 0.42
DDX39AO00148 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DDX39AO00148 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
DDX39AO00148 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC17.68■□□□□ 0.42
DDX39AO00148 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC17.68■□□□□ 0.42
DDX39AO00148 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC17.68■□□□□ 0.42
DDX39AO00148 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC17.68■□□□□ 0.42
DDX39AO00148 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC17.68■□□□□ 0.42
DDX39AO00148 IGHV3-72-202ENST00000621503 303 ntBASIC17.68■□□□□ 0.42
DDX39AO00148 CU639417.3-201ENST00000624240 1404 ntBASIC17.68■□□□□ 0.42
DDX39AO00148 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DDX39AO00148 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.68■□□□□ 0.42
DDX39AO00148 TKT-202ENST00000423516 2075 ntTSL 2 BASIC17.68■□□□□ 0.42
DDX39AO00148 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
DDX39AO00148 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
DDX39AO00148 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DDX39AO00148 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.68■□□□□ 0.42
DDX39AO00148 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
DDX39AO00148 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DDX39AO00148 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
DDX39AO00148 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DDX39AO00148 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
DDX39AO00148 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.67■□□□□ 0.42
DDX39AO00148 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
DDX39AO00148 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.67■□□□□ 0.42
DDX39AO00148 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
DDX39AO00148 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC17.67■□□□□ 0.42
DDX39AO00148 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
DDX39AO00148 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC17.67■□□□□ 0.42
DDX39AO00148 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DDX39AO00148 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
DDX39AO00148 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
DDX39AO00148 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC17.67■□□□□ 0.42
DDX39AO00148 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC17.67■□□□□ 0.42
DDX39AO00148 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
DDX39AO00148 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC17.67■□□□□ 0.42
DDX39AO00148 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC17.67■□□□□ 0.42
DDX39AO00148 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
DDX39AO00148 AC092552.1-201ENST00000547243 906 ntBASIC17.67■□□□□ 0.42
DDX39AO00148 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC17.67■□□□□ 0.42
DDX39AO00148 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC17.67■□□□□ 0.42
DDX39AO00148 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC17.67■□□□□ 0.42
DDX39AO00148 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC17.67■□□□□ 0.42
DDX39AO00148 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DDX39AO00148 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DDX39AO00148 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
DDX39AO00148 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
DDX39AO00148 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
DDX39AO00148 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DDX39AO00148 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.67■□□□□ 0.42
DDX39AO00148 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
DDX39AO00148 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC17.67■□□□□ 0.42
DDX39AO00148 TP73-209ENST00000603362 1668 ntTSL 5 BASIC17.67■□□□□ 0.42
DDX39AO00148 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
DDX39AO00148 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DDX39AO00148 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
DDX39AO00148 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
DDX39AO00148 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms