Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
TRIM49D1C9J1S8 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.83■□□□□ 0.13
TRIM49D1C9J1S8 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.13
TRIM49D1C9J1S8 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRIM49D1C9J1S8 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
TRIM49D1C9J1S8 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRIM49D1C9J1S8 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRIM49D1C9J1S8 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.83■□□□□ 0.13
TRIM49D1C9J1S8 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
TRIM49D1C9J1S8 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRIM49D1C9J1S8 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRIM49D1C9J1S8 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM49D1C9J1S8 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM49D1C9J1S8 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
TRIM49D1C9J1S8 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM49D1C9J1S8 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM49D1C9J1S8 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
TRIM49D1C9J1S8 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM49D1C9J1S8 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM49D1C9J1S8 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
TRIM49D1C9J1S8 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM49D1C9J1S8 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM49D1C9J1S8 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.83■□□□□ 0.12
TRIM49D1C9J1S8 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.83■□□□□ 0.12
TRIM49D1C9J1S8 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.83■□□□□ 0.12
TRIM49D1C9J1S8 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.83■□□□□ 0.12
TRIM49D1C9J1S8 PHKG1P2-201ENST00000457537 863 ntBASIC15.83■□□□□ 0.12
TRIM49D1C9J1S8 CCDC74BP1-201ENST00000508880 1123 ntBASIC15.83■□□□□ 0.12
TRIM49D1C9J1S8 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.83■□□□□ 0.12
TRIM49D1C9J1S8 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.83■□□□□ 0.12
TRIM49D1C9J1S8 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
TRIM49D1C9J1S8 AC027307.2-201ENST00000591252 911 ntBASIC15.83■□□□□ 0.12
TRIM49D1C9J1S8 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.83■□□□□ 0.12
TRIM49D1C9J1S8 AL513190.1-201ENST00000621254 727 ntBASIC15.83■□□□□ 0.12
TRIM49D1C9J1S8 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC15.83■□□□□ 0.12
TRIM49D1C9J1S8 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM49D1C9J1S8 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM49D1C9J1S8 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM49D1C9J1S8 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM49D1C9J1S8 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM49D1C9J1S8 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
TRIM49D1C9J1S8 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM49D1C9J1S8 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
TRIM49D1C9J1S8 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
TRIM49D1C9J1S8 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
TRIM49D1C9J1S8 MIR600HG-201ENST00000449175 5984 ntBASIC15.83■□□□□ 0.12
TRIM49D1C9J1S8 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.83■□□□□ 0.12
TRIM49D1C9J1S8 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM49D1C9J1S8 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.83■□□□□ 0.12
TRIM49D1C9J1S8 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM49D1C9J1S8 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRIM49D1C9J1S8 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.82■□□□□ 0.12
TRIM49D1C9J1S8 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM49D1C9J1S8 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM49D1C9J1S8 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
TRIM49D1C9J1S8 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM49D1C9J1S8 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.82■□□□□ 0.12
TRIM49D1C9J1S8 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM49D1C9J1S8 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM49D1C9J1S8 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM49D1C9J1S8 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
TRIM49D1C9J1S8 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.82■□□□□ 0.12
TRIM49D1C9J1S8 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
TRIM49D1C9J1S8 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM49D1C9J1S8 FGD5P1-202ENST00000614866 2498 ntBASIC15.82■□□□□ 0.12
TRIM49D1C9J1S8 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
TRIM49D1C9J1S8 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM49D1C9J1S8 AC142381.1-201ENST00000426099 345 ntBASIC15.82■□□□□ 0.12
TRIM49D1C9J1S8 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.82■□□□□ 0.12
TRIM49D1C9J1S8 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.82■□□□□ 0.12
TRIM49D1C9J1S8 AL662844.1-201ENST00000546340 181 ntBASIC15.82■□□□□ 0.12
TRIM49D1C9J1S8 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.82■□□□□ 0.12
TRIM49D1C9J1S8 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM49D1C9J1S8 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM49D1C9J1S8 HLA-A-201ENST00000376802 1334 ntBASIC15.82■□□□□ 0.12
TRIM49D1C9J1S8 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM49D1C9J1S8 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM49D1C9J1S8 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
TRIM49D1C9J1S8 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.82■□□□□ 0.12
TRIM49D1C9J1S8 KRT8P37-201ENST00000451609 1420 ntBASIC15.82■□□□□ 0.12
TRIM49D1C9J1S8 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
TRIM49D1C9J1S8 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM49D1C9J1S8 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
TRIM49D1C9J1S8 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM49D1C9J1S8 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.82■□□□□ 0.12
TRIM49D1C9J1S8 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.82■□□□□ 0.12
TRIM49D1C9J1S8 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM49D1C9J1S8 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
TRIM49D1C9J1S8 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM49D1C9J1S8 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
TRIM49D1C9J1S8 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM49D1C9J1S8 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM49D1C9J1S8 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
TRIM49D1C9J1S8 AL390755.1-201ENST00000623716 2027 ntBASIC15.82■□□□□ 0.12
TRIM49D1C9J1S8 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM49D1C9J1S8 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
TRIM49D1C9J1S8 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
TRIM49D1C9J1S8 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
TRIM49D1C9J1S8 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM49D1C9J1S8 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms