Protein–RNA interactions for Protein: A0A1W2PPD8

KDM4F, Lysine demethylase 4F, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4FA0A1W2PPD8 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
KDM4FA0A1W2PPD8 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC22.18■■□□□ 1.14
KDM4FA0A1W2PPD8 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
KDM4FA0A1W2PPD8 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
KDM4FA0A1W2PPD8 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
KDM4FA0A1W2PPD8 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
KDM4FA0A1W2PPD8 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
KDM4FA0A1W2PPD8 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
KDM4FA0A1W2PPD8 RN7SKP109-201ENST00000410592 316 ntBASIC22.18■■□□□ 1.14
KDM4FA0A1W2PPD8 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC22.18■■□□□ 1.14
KDM4FA0A1W2PPD8 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC22.18■■□□□ 1.14
KDM4FA0A1W2PPD8 AC022966.2-201ENST00000587434 367 ntBASIC22.18■■□□□ 1.14
KDM4FA0A1W2PPD8 BIRC5-211ENST00000592734 386 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
KDM4FA0A1W2PPD8 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC22.18■■□□□ 1.14
KDM4FA0A1W2PPD8 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC22.18■■□□□ 1.14
KDM4FA0A1W2PPD8 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC22.18■■□□□ 1.14
KDM4FA0A1W2PPD8 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC22.17■■□□□ 1.14
KDM4FA0A1W2PPD8 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC22.17■■□□□ 1.14
KDM4FA0A1W2PPD8 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
KDM4FA0A1W2PPD8 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC22.17■■□□□ 1.14
KDM4FA0A1W2PPD8 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC22.17■■□□□ 1.14
KDM4FA0A1W2PPD8 GGT3P-204ENST00000453783 1664 ntBASIC22.17■■□□□ 1.14
KDM4FA0A1W2PPD8 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC22.17■■□□□ 1.14
KDM4FA0A1W2PPD8 AC008536.3-201ENST00000623282 1599 ntBASIC22.17■■□□□ 1.14
KDM4FA0A1W2PPD8 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
KDM4FA0A1W2PPD8 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
KDM4FA0A1W2PPD8 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
KDM4FA0A1W2PPD8 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
KDM4FA0A1W2PPD8 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
KDM4FA0A1W2PPD8 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC22.17■■□□□ 1.14
KDM4FA0A1W2PPD8 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
KDM4FA0A1W2PPD8 DBNDD2-207ENST00000372722 1202 ntTSL 3 BASIC22.17■■□□□ 1.14
KDM4FA0A1W2PPD8 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC22.17■■□□□ 1.14
KDM4FA0A1W2PPD8 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
KDM4FA0A1W2PPD8 EEF1DP5-201ENST00000431410 772 ntBASIC22.17■■□□□ 1.14
KDM4FA0A1W2PPD8 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
KDM4FA0A1W2PPD8 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC22.17■■□□□ 1.14
KDM4FA0A1W2PPD8 CDC23-208ENST00000505120 455 ntTSL 3 BASIC22.17■■□□□ 1.14
KDM4FA0A1W2PPD8 AC012593.1-214ENST00000586952 767 ntTSL 5 BASIC22.17■■□□□ 1.14
KDM4FA0A1W2PPD8 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC22.17■■□□□ 1.14
KDM4FA0A1W2PPD8 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC22.17■■□□□ 1.14
KDM4FA0A1W2PPD8 AC055811.4-201ENST00000624039 1754 ntBASIC22.17■■□□□ 1.14
KDM4FA0A1W2PPD8 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC22.17■■□□□ 1.14
KDM4FA0A1W2PPD8 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
KDM4FA0A1W2PPD8 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC22.17■■□□□ 1.14
KDM4FA0A1W2PPD8 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
KDM4FA0A1W2PPD8 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC22.17■■□□□ 1.14
KDM4FA0A1W2PPD8 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
KDM4FA0A1W2PPD8 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
KDM4FA0A1W2PPD8 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
KDM4FA0A1W2PPD8 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC22.16■■□□□ 1.14
KDM4FA0A1W2PPD8 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
KDM4FA0A1W2PPD8 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
KDM4FA0A1W2PPD8 INE2-201ENST00000630399 1874 ntBASIC22.16■■□□□ 1.14
KDM4FA0A1W2PPD8 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC22.16■■□□□ 1.14
KDM4FA0A1W2PPD8 AL157823.1-201ENST00000403727 628 ntBASIC22.16■■□□□ 1.14
KDM4FA0A1W2PPD8 CSNK1G2P1-201ENST00000442675 955 ntBASIC22.16■■□□□ 1.14
KDM4FA0A1W2PPD8 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
KDM4FA0A1W2PPD8 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
KDM4FA0A1W2PPD8 AP000920.1-201ENST00000531824 344 ntBASIC22.16■■□□□ 1.14
KDM4FA0A1W2PPD8 MIR3188-201ENST00000583494 85 ntBASIC22.16■■□□□ 1.14
KDM4FA0A1W2PPD8 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC22.16■■□□□ 1.14
KDM4FA0A1W2PPD8 NEK4P3-201ENST00000604859 544 ntBASIC22.16■■□□□ 1.14
KDM4FA0A1W2PPD8 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC22.16■■□□□ 1.14
KDM4FA0A1W2PPD8 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
KDM4FA0A1W2PPD8 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
KDM4FA0A1W2PPD8 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC22.16■■□□□ 1.14
KDM4FA0A1W2PPD8 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC22.15■■□□□ 1.14
KDM4FA0A1W2PPD8 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC22.15■■□□□ 1.14
KDM4FA0A1W2PPD8 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
KDM4FA0A1W2PPD8 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
KDM4FA0A1W2PPD8 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC22.15■■□□□ 1.14
KDM4FA0A1W2PPD8 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
KDM4FA0A1W2PPD8 AC018892.3-201ENST00000623986 2499 ntBASIC22.15■■□□□ 1.14
KDM4FA0A1W2PPD8 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
KDM4FA0A1W2PPD8 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
KDM4FA0A1W2PPD8 ECHDC2-201ENST00000358358 1126 ntTSL 2 BASIC22.15■■□□□ 1.14
KDM4FA0A1W2PPD8 PLA2G2A-201ENST00000375111 970 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
KDM4FA0A1W2PPD8 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC22.15■■□□□ 1.14
KDM4FA0A1W2PPD8 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
KDM4FA0A1W2PPD8 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
KDM4FA0A1W2PPD8 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC22.15■■□□□ 1.14
KDM4FA0A1W2PPD8 SOD2-205ENST00000444946 917 ntTSL 2 BASIC22.15■■□□□ 1.14
KDM4FA0A1W2PPD8 GNG10P1-201ENST00000452289 199 ntBASIC22.15■■□□□ 1.14
KDM4FA0A1W2PPD8 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC22.15■■□□□ 1.14
KDM4FA0A1W2PPD8 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
KDM4FA0A1W2PPD8 APOC1-209ENST00000592885 562 ntTSL 3 BASIC22.15■■□□□ 1.14
KDM4FA0A1W2PPD8 AC009884.2-201ENST00000603110 324 ntBASIC22.15■■□□□ 1.14
KDM4FA0A1W2PPD8 AC010976.2-201ENST00000609697 852 ntBASIC22.15■■□□□ 1.14
KDM4FA0A1W2PPD8 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
KDM4FA0A1W2PPD8 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC22.15■■□□□ 1.14
KDM4FA0A1W2PPD8 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC22.15■■□□□ 1.14
KDM4FA0A1W2PPD8 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC22.15■■□□□ 1.14
KDM4FA0A1W2PPD8 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
KDM4FA0A1W2PPD8 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC22.15■■□□□ 1.14
KDM4FA0A1W2PPD8 MFF-204ENST00000353339 2186 ntTSL 5 BASIC22.15■■□□□ 1.14
KDM4FA0A1W2PPD8 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
KDM4FA0A1W2PPD8 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
KDM4FA0A1W2PPD8 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
KDM4FA0A1W2PPD8 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms