Protein–RNA interactions for Protein: Q9Y5U2

TSSC4, Protein TSSC4, humanhuman

Predicted RBP Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4Q9Y5U2 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC18.2■□□□□ 0.5
TSSC4Q9Y5U2 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
TSSC4Q9Y5U2 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TSSC4Q9Y5U2 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TSSC4Q9Y5U2 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TSSC4Q9Y5U2 ERN1-208ENST00000606895 2068 ntBASIC18.19■□□□□ 0.5
TSSC4Q9Y5U2 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
TSSC4Q9Y5U2 AC010501.1-201ENST00000606270 1962 ntBASIC18.19■□□□□ 0.5
TSSC4Q9Y5U2 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC18.19■□□□□ 0.5
TSSC4Q9Y5U2 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TSSC4Q9Y5U2 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TSSC4Q9Y5U2 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC18.19■□□□□ 0.5
TSSC4Q9Y5U2 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC18.19■□□□□ 0.5
TSSC4Q9Y5U2 AC096887.2-201ENST00000623443 1957 ntBASIC18.19■□□□□ 0.5
TSSC4Q9Y5U2 AC090877.2-201ENST00000558441 1738 ntBASIC18.18■□□□□ 0.5
TSSC4Q9Y5U2 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TSSC4Q9Y5U2 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TSSC4Q9Y5U2 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
TSSC4Q9Y5U2 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.18■□□□□ 0.5
TSSC4Q9Y5U2 MIR6724-1-201ENST00000616420 92 ntBASIC18.18■□□□□ 0.5
TSSC4Q9Y5U2 MIR6724-2-201ENST00000616483 92 ntBASIC18.18■□□□□ 0.5
TSSC4Q9Y5U2 MIR6724-4-201ENST00000617390 92 ntBASIC18.18■□□□□ 0.5
TSSC4Q9Y5U2 MIR6724-3-201ENST00000622482 92 ntBASIC18.18■□□□□ 0.5
TSSC4Q9Y5U2 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TSSC4Q9Y5U2 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TSSC4Q9Y5U2 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TSSC4Q9Y5U2 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC18.17■□□□□ 0.5
TSSC4Q9Y5U2 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TSSC4Q9Y5U2 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TSSC4Q9Y5U2 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TSSC4Q9Y5U2 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TSSC4Q9Y5U2 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TSSC4Q9Y5U2 SENP5-202ENST00000419026 973 ntTSL 3 BASIC18.17■□□□□ 0.5
TSSC4Q9Y5U2 PEMT-206ENST00000435340 960 ntTSL 5 BASIC18.17■□□□□ 0.5
TSSC4Q9Y5U2 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TSSC4Q9Y5U2 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC18.16■□□□□ 0.5
TSSC4Q9Y5U2 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TSSC4Q9Y5U2 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC18.16■□□□□ 0.5
TSSC4Q9Y5U2 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TSSC4Q9Y5U2 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
TSSC4Q9Y5U2 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TSSC4Q9Y5U2 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC18.16■□□□□ 0.5
TSSC4Q9Y5U2 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC18.16■□□□□ 0.5
TSSC4Q9Y5U2 SRR-208ENST00000576848 588 ntTSL 4 BASIC18.16■□□□□ 0.5
TSSC4Q9Y5U2 EXOG-217ENST00000630638 197 ntTSL 5 BASIC18.16■□□□□ 0.5
TSSC4Q9Y5U2 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TSSC4Q9Y5U2 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TSSC4Q9Y5U2 AF131216.4-201ENST00000638924 1588 ntBASIC18.16■□□□□ 0.5
TSSC4Q9Y5U2 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TSSC4Q9Y5U2 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TSSC4Q9Y5U2 LTK-203ENST00000453182 2412 ntTSL 2 BASIC18.15■□□□□ 0.5
TSSC4Q9Y5U2 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TSSC4Q9Y5U2 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TSSC4Q9Y5U2 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
TSSC4Q9Y5U2 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
TSSC4Q9Y5U2 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC18.15■□□□□ 0.5
TSSC4Q9Y5U2 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC18.15■□□□□ 0.5
TSSC4Q9Y5U2 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC18.15■□□□□ 0.5
TSSC4Q9Y5U2 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
TSSC4Q9Y5U2 AC019069.1-201ENST00000610008 1333 ntBASIC18.15■□□□□ 0.5
TSSC4Q9Y5U2 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC18.15■□□□□ 0.5
TSSC4Q9Y5U2 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC18.15■□□□□ 0.5
TSSC4Q9Y5U2 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.5
TSSC4Q9Y5U2 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
TSSC4Q9Y5U2 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
TSSC4Q9Y5U2 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TSSC4Q9Y5U2 RPP21-222ENST00000433076 577 ntTSL 2 BASIC18.14■□□□□ 0.49
TSSC4Q9Y5U2 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TSSC4Q9Y5U2 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC18.14■□□□□ 0.49
TSSC4Q9Y5U2 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC18.14■□□□□ 0.49
TSSC4Q9Y5U2 CLTA-210ENST00000540080 989 ntTSL 2 BASIC18.14■□□□□ 0.49
TSSC4Q9Y5U2 LSM7-203ENST00000585409 512 ntTSL 2 BASIC18.14■□□□□ 0.49
TSSC4Q9Y5U2 AL356740.2-201ENST00000601559 647 ntBASIC18.14■□□□□ 0.49
TSSC4Q9Y5U2 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
TSSC4Q9Y5U2 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
TSSC4Q9Y5U2 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TSSC4Q9Y5U2 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
TSSC4Q9Y5U2 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC18.13■□□□□ 0.49
TSSC4Q9Y5U2 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
TSSC4Q9Y5U2 TRIR-202ENST00000588213 841 ntTSL 3 BASIC18.13■□□□□ 0.49
TSSC4Q9Y5U2 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TSSC4Q9Y5U2 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC18.13■□□□□ 0.49
TSSC4Q9Y5U2 AL117332.1-201ENST00000622628 974 ntBASIC18.13■□□□□ 0.49
TSSC4Q9Y5U2 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TSSC4Q9Y5U2 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TSSC4Q9Y5U2 AC092803.2-201ENST00000564287 1899 ntBASIC18.12■□□□□ 0.49
TSSC4Q9Y5U2 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC18.12■□□□□ 0.49
TSSC4Q9Y5U2 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TSSC4Q9Y5U2 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC18.12■□□□□ 0.49
TSSC4Q9Y5U2 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC18.12■□□□□ 0.49
TSSC4Q9Y5U2 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC18.12■□□□□ 0.49
TSSC4Q9Y5U2 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC18.12■□□□□ 0.49
TSSC4Q9Y5U2 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TSSC4Q9Y5U2 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC18.12■□□□□ 0.49
TSSC4Q9Y5U2 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TSSC4Q9Y5U2 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TSSC4Q9Y5U2 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
TSSC4Q9Y5U2 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TSSC4Q9Y5U2 LSM4-201ENST00000252816 986 ntTSL 2 BASIC18.11■□□□□ 0.49
TSSC4Q9Y5U2 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms