Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHGB1Q9Y5G3 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.29■■□□□ 1
PCDHGB1Q9Y5G3 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHGB1Q9Y5G3 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.29■■□□□ 1
PCDHGB1Q9Y5G3 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC21.29■■□□□ 1
PCDHGB1Q9Y5G3 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHGB1Q9Y5G3 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.29■■□□□ 1
PCDHGB1Q9Y5G3 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.29■■□□□ 1
PCDHGB1Q9Y5G3 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.29■■□□□ 1
PCDHGB1Q9Y5G3 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.28■■□□□ 1
PCDHGB1Q9Y5G3 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
PCDHGB1Q9Y5G3 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.28■■□□□ 1
PCDHGB1Q9Y5G3 MIR3648-2-201ENST00000581792 180 ntBASIC21.28■■□□□ 1
PCDHGB1Q9Y5G3 MIR3648-1-201ENST00000615959 180 ntBASIC21.28■■□□□ 1
PCDHGB1Q9Y5G3 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.28■■□□□ 1
PCDHGB1Q9Y5G3 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.27■■□□□ 1
PCDHGB1Q9Y5G3 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PCDHGB1Q9Y5G3 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.27■■□□□ 1
PCDHGB1Q9Y5G3 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PCDHGB1Q9Y5G3 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PCDHGB1Q9Y5G3 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
PCDHGB1Q9Y5G3 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC21.27■■□□□ 1
PCDHGB1Q9Y5G3 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC21.27■■□□□ 1
PCDHGB1Q9Y5G3 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.27■■□□□ 1
PCDHGB1Q9Y5G3 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.27■□□□□ 0.99
PCDHGB1Q9Y5G3 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
PCDHGB1Q9Y5G3 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
PCDHGB1Q9Y5G3 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.26■□□□□ 0.99
PCDHGB1Q9Y5G3 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHGB1Q9Y5G3 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHGB1Q9Y5G3 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHGB1Q9Y5G3 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.26■□□□□ 0.99
PCDHGB1Q9Y5G3 BRD4-212ENST00000630599 726 ntTSL 2 BASIC21.26■□□□□ 0.99
PCDHGB1Q9Y5G3 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHGB1Q9Y5G3 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
PCDHGB1Q9Y5G3 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHGB1Q9Y5G3 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHGB1Q9Y5G3 LINC00565-201ENST00000562710 2331 ntBASIC21.26■□□□□ 0.99
PCDHGB1Q9Y5G3 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHGB1Q9Y5G3 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.25■□□□□ 0.99
PCDHGB1Q9Y5G3 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHGB1Q9Y5G3 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.25■□□□□ 0.99
PCDHGB1Q9Y5G3 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
PCDHGB1Q9Y5G3 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC21.25■□□□□ 0.99
PCDHGB1Q9Y5G3 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHGB1Q9Y5G3 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHGB1Q9Y5G3 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHGB1Q9Y5G3 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
PCDHGB1Q9Y5G3 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
PCDHGB1Q9Y5G3 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
PCDHGB1Q9Y5G3 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHGB1Q9Y5G3 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHGB1Q9Y5G3 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.24■□□□□ 0.99
PCDHGB1Q9Y5G3 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHGB1Q9Y5G3 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHGB1Q9Y5G3 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.24■□□□□ 0.99
PCDHGB1Q9Y5G3 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHGB1Q9Y5G3 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.24■□□□□ 0.99
PCDHGB1Q9Y5G3 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.24■□□□□ 0.99
PCDHGB1Q9Y5G3 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHGB1Q9Y5G3 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.24■□□□□ 0.99
PCDHGB1Q9Y5G3 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
PCDHGB1Q9Y5G3 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHGB1Q9Y5G3 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.24■□□□□ 0.99
PCDHGB1Q9Y5G3 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHGB1Q9Y5G3 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHGB1Q9Y5G3 AC126177.7-201ENST00000547904 679 ntBASIC21.23■□□□□ 0.99
PCDHGB1Q9Y5G3 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHGB1Q9Y5G3 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PCDHGB1Q9Y5G3 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
PCDHGB1Q9Y5G3 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
PCDHGB1Q9Y5G3 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHGB1Q9Y5G3 AC233723.2-201ENST00000623798 2106 ntBASIC21.22■□□□□ 0.99
PCDHGB1Q9Y5G3 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHGB1Q9Y5G3 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHGB1Q9Y5G3 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHGB1Q9Y5G3 EP400NL-214ENST00000641289 2402 ntBASIC21.22■□□□□ 0.99
PCDHGB1Q9Y5G3 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
PCDHGB1Q9Y5G3 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.22■□□□□ 0.99
PCDHGB1Q9Y5G3 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHGB1Q9Y5G3 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
PCDHGB1Q9Y5G3 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHGB1Q9Y5G3 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PCDHGB1Q9Y5G3 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
PCDHGB1Q9Y5G3 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
PCDHGB1Q9Y5G3 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.21■□□□□ 0.99
PCDHGB1Q9Y5G3 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.21■□□□□ 0.99
PCDHGB1Q9Y5G3 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
PCDHGB1Q9Y5G3 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
PCDHGB1Q9Y5G3 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHGB1Q9Y5G3 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHGB1Q9Y5G3 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21.21■□□□□ 0.99
PCDHGB1Q9Y5G3 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.21■□□□□ 0.99
PCDHGB1Q9Y5G3 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHGB1Q9Y5G3 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.21■□□□□ 0.99
PCDHGB1Q9Y5G3 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
PCDHGB1Q9Y5G3 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHGB1Q9Y5G3 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCDHGB1Q9Y5G3 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
PCDHGB1Q9Y5G3 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.2■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms