Protein–RNA interactions for Protein: Q9Y5E4

PCDHB5, Protocadherin beta-5, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB5Q9Y5E4 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC24.72■■□□□ 1.55
PCDHB5Q9Y5E4 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
PCDHB5Q9Y5E4 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC24.72■■□□□ 1.55
PCDHB5Q9Y5E4 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC24.72■■□□□ 1.55
PCDHB5Q9Y5E4 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
PCDHB5Q9Y5E4 SLC6A10P-202ENST00000431994 2058 ntBASIC24.71■■□□□ 1.55
PCDHB5Q9Y5E4 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
PCDHB5Q9Y5E4 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
PCDHB5Q9Y5E4 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
PCDHB5Q9Y5E4 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC24.71■■□□□ 1.55
PCDHB5Q9Y5E4 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC24.71■■□□□ 1.55
PCDHB5Q9Y5E4 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC24.71■■□□□ 1.55
PCDHB5Q9Y5E4 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC24.71■■□□□ 1.55
PCDHB5Q9Y5E4 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
PCDHB5Q9Y5E4 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.54
PCDHB5Q9Y5E4 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC24.7■■□□□ 1.54
PCDHB5Q9Y5E4 MTDHP2-201ENST00000601468 714 ntBASIC24.7■■□□□ 1.54
PCDHB5Q9Y5E4 AC010997.5-201ENST00000609182 354 ntBASIC24.7■■□□□ 1.54
PCDHB5Q9Y5E4 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
PCDHB5Q9Y5E4 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHB5Q9Y5E4 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHB5Q9Y5E4 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC24.69■■□□□ 1.54
PCDHB5Q9Y5E4 CEBPA-AS1-201ENST00000592982 2198 ntBASIC24.69■■□□□ 1.54
PCDHB5Q9Y5E4 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHB5Q9Y5E4 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHB5Q9Y5E4 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHB5Q9Y5E4 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC24.69■■□□□ 1.54
PCDHB5Q9Y5E4 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHB5Q9Y5E4 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
PCDHB5Q9Y5E4 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC24.69■■□□□ 1.54
PCDHB5Q9Y5E4 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
PCDHB5Q9Y5E4 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHB5Q9Y5E4 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHB5Q9Y5E4 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC24.68■■□□□ 1.54
PCDHB5Q9Y5E4 CLTA-210ENST00000540080 989 ntTSL 2 BASIC24.68■■□□□ 1.54
PCDHB5Q9Y5E4 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC24.68■■□□□ 1.54
PCDHB5Q9Y5E4 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHB5Q9Y5E4 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
PCDHB5Q9Y5E4 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC24.67■■□□□ 1.54
PCDHB5Q9Y5E4 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC24.67■■□□□ 1.54
PCDHB5Q9Y5E4 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
PCDHB5Q9Y5E4 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC24.66■■□□□ 1.54
PCDHB5Q9Y5E4 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
PCDHB5Q9Y5E4 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC24.65■■□□□ 1.54
PCDHB5Q9Y5E4 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC24.65■■□□□ 1.54
PCDHB5Q9Y5E4 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
PCDHB5Q9Y5E4 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PCDHB5Q9Y5E4 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
PCDHB5Q9Y5E4 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.54
PCDHB5Q9Y5E4 LBH-205ENST00000407930 756 ntTSL 2 BASIC24.64■■□□□ 1.54
PCDHB5Q9Y5E4 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC24.64■■□□□ 1.54
PCDHB5Q9Y5E4 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC24.64■■□□□ 1.54
PCDHB5Q9Y5E4 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC24.64■■□□□ 1.54
PCDHB5Q9Y5E4 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
PCDHB5Q9Y5E4 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC24.63■■□□□ 1.53
PCDHB5Q9Y5E4 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC24.63■■□□□ 1.53
PCDHB5Q9Y5E4 MIR6724-1-201ENST00000616420 92 ntBASIC24.63■■□□□ 1.53
PCDHB5Q9Y5E4 MIR6724-2-201ENST00000616483 92 ntBASIC24.63■■□□□ 1.53
PCDHB5Q9Y5E4 MIR6724-4-201ENST00000617390 92 ntBASIC24.63■■□□□ 1.53
PCDHB5Q9Y5E4 MIR6724-3-201ENST00000622482 92 ntBASIC24.63■■□□□ 1.53
PCDHB5Q9Y5E4 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC24.63■■□□□ 1.53
PCDHB5Q9Y5E4 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PCDHB5Q9Y5E4 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHB5Q9Y5E4 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC24.62■■□□□ 1.53
PCDHB5Q9Y5E4 EXOG-217ENST00000630638 197 ntTSL 5 BASIC24.62■■□□□ 1.53
PCDHB5Q9Y5E4 LSM4-201ENST00000252816 986 ntTSL 2 BASIC24.61■■□□□ 1.53
PCDHB5Q9Y5E4 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC24.61■■□□□ 1.53
PCDHB5Q9Y5E4 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC24.61■■□□□ 1.53
PCDHB5Q9Y5E4 SNX5-217ENST00000606557 1087 ntBASIC24.61■■□□□ 1.53
PCDHB5Q9Y5E4 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
PCDHB5Q9Y5E4 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHB5Q9Y5E4 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHB5Q9Y5E4 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC24.6■■□□□ 1.53
PCDHB5Q9Y5E4 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC24.6■■□□□ 1.53
PCDHB5Q9Y5E4 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHB5Q9Y5E4 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHB5Q9Y5E4 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC24.6■■□□□ 1.53
PCDHB5Q9Y5E4 MIR6089-201ENST00000616698 64 ntBASIC24.6■■□□□ 1.53
PCDHB5Q9Y5E4 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHB5Q9Y5E4 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC24.6■■□□□ 1.53
PCDHB5Q9Y5E4 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHB5Q9Y5E4 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHB5Q9Y5E4 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
PCDHB5Q9Y5E4 LSM7-203ENST00000585409 512 ntTSL 2 BASIC24.59■■□□□ 1.53
PCDHB5Q9Y5E4 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC24.59■■□□□ 1.53
PCDHB5Q9Y5E4 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PCDHB5Q9Y5E4 AC008406.3-201ENST00000620001 1374 ntBASIC24.58■■□□□ 1.53
PCDHB5Q9Y5E4 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
PCDHB5Q9Y5E4 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
PCDHB5Q9Y5E4 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
PCDHB5Q9Y5E4 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.53
PCDHB5Q9Y5E4 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
PCDHB5Q9Y5E4 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.52
PCDHB5Q9Y5E4 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
PCDHB5Q9Y5E4 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
PCDHB5Q9Y5E4 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC24.57■■□□□ 1.52
PCDHB5Q9Y5E4 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
PCDHB5Q9Y5E4 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
PCDHB5Q9Y5E4 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
PCDHB5Q9Y5E4 AL117332.1-201ENST00000622628 974 ntBASIC24.56■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms