Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 AC012676.1-201ENST00000574705 1949 ntBASIC21.04■□□□□ 0.96
HINT3Q9NQE9 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HINT3Q9NQE9 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HINT3Q9NQE9 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
HINT3Q9NQE9 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC21.04■□□□□ 0.96
HINT3Q9NQE9 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HINT3Q9NQE9 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
HINT3Q9NQE9 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
HINT3Q9NQE9 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HINT3Q9NQE9 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC21.04■□□□□ 0.96
HINT3Q9NQE9 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.03■□□□□ 0.96
HINT3Q9NQE9 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HINT3Q9NQE9 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
HINT3Q9NQE9 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.02■□□□□ 0.96
HINT3Q9NQE9 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.02■□□□□ 0.96
HINT3Q9NQE9 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HINT3Q9NQE9 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.02■□□□□ 0.96
HINT3Q9NQE9 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.02■□□□□ 0.96
HINT3Q9NQE9 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.02■□□□□ 0.96
HINT3Q9NQE9 RP9P-202ENST00000450133 1212 ntBASIC21.02■□□□□ 0.96
HINT3Q9NQE9 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.02■□□□□ 0.96
HINT3Q9NQE9 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
HINT3Q9NQE9 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
HINT3Q9NQE9 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
HINT3Q9NQE9 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
HINT3Q9NQE9 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
HINT3Q9NQE9 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
HINT3Q9NQE9 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
HINT3Q9NQE9 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HINT3Q9NQE9 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.01■□□□□ 0.95
HINT3Q9NQE9 HLA-L-211ENST00000482052 1765 ntBASIC21.01■□□□□ 0.95
HINT3Q9NQE9 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
HINT3Q9NQE9 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HINT3Q9NQE9 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HINT3Q9NQE9 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21.01■□□□□ 0.95
HINT3Q9NQE9 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC21.01■□□□□ 0.95
HINT3Q9NQE9 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
HINT3Q9NQE9 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.01■□□□□ 0.95
HINT3Q9NQE9 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HINT3Q9NQE9 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21■□□□□ 0.95
HINT3Q9NQE9 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HINT3Q9NQE9 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HINT3Q9NQE9 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
HINT3Q9NQE9 HYI-213ENST00000583037 1322 ntTSL 5 BASIC21■□□□□ 0.95
HINT3Q9NQE9 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
HINT3Q9NQE9 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.99■□□□□ 0.95
HINT3Q9NQE9 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HINT3Q9NQE9 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HINT3Q9NQE9 DUSP8P5-201ENST00000422884 1815 ntBASIC20.99■□□□□ 0.95
HINT3Q9NQE9 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HINT3Q9NQE9 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HINT3Q9NQE9 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
HINT3Q9NQE9 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
HINT3Q9NQE9 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.99■□□□□ 0.95
HINT3Q9NQE9 AC093536.1-201ENST00000569153 554 ntBASIC20.99■□□□□ 0.95
HINT3Q9NQE9 AC007029.1-201ENST00000604183 313 ntBASIC20.99■□□□□ 0.95
HINT3Q9NQE9 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HINT3Q9NQE9 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HINT3Q9NQE9 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
HINT3Q9NQE9 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
HINT3Q9NQE9 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HINT3Q9NQE9 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
HINT3Q9NQE9 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HINT3Q9NQE9 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.98■□□□□ 0.95
HINT3Q9NQE9 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
HINT3Q9NQE9 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20.98■□□□□ 0.95
HINT3Q9NQE9 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HINT3Q9NQE9 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.97■□□□□ 0.95
HINT3Q9NQE9 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HINT3Q9NQE9 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HINT3Q9NQE9 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HINT3Q9NQE9 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.97■□□□□ 0.95
HINT3Q9NQE9 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HINT3Q9NQE9 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HINT3Q9NQE9 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
HINT3Q9NQE9 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
HINT3Q9NQE9 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
HINT3Q9NQE9 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
HINT3Q9NQE9 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HINT3Q9NQE9 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
HINT3Q9NQE9 NTF6A-201ENST00000591175 560 ntBASIC20.96■□□□□ 0.95
HINT3Q9NQE9 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HINT3Q9NQE9 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HINT3Q9NQE9 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HINT3Q9NQE9 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.96■□□□□ 0.95
HINT3Q9NQE9 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HINT3Q9NQE9 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HINT3Q9NQE9 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.95■□□□□ 0.95
HINT3Q9NQE9 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HINT3Q9NQE9 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
HINT3Q9NQE9 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.95■□□□□ 0.94
HINT3Q9NQE9 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
HINT3Q9NQE9 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
HINT3Q9NQE9 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
HINT3Q9NQE9 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
HINT3Q9NQE9 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HINT3Q9NQE9 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HINT3Q9NQE9 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
HINT3Q9NQE9 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
HINT3Q9NQE9 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms