Protein–RNA interactions for Protein: Q9NQ36

SCUBE2, Signal peptide, CUB and EGF-like domain-containing protein 2, humanhuman

Predictions only

Length 999 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2Q9NQ36 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SCUBE2Q9NQ36 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SCUBE2Q9NQ36 AL356441.2-201ENST00000443009 864 ntBASIC23.79■■□□□ 1.4
SCUBE2Q9NQ36 SSSCA1-AS1-201ENST00000567594 614 ntBASIC23.79■■□□□ 1.4
SCUBE2Q9NQ36 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC23.79■■□□□ 1.4
SCUBE2Q9NQ36 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SCUBE2Q9NQ36 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SCUBE2Q9NQ36 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
SCUBE2Q9NQ36 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC23.78■■□□□ 1.4
SCUBE2Q9NQ36 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SCUBE2Q9NQ36 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC23.78■■□□□ 1.4
SCUBE2Q9NQ36 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC23.78■■□□□ 1.4
SCUBE2Q9NQ36 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
SCUBE2Q9NQ36 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SCUBE2Q9NQ36 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SCUBE2Q9NQ36 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SCUBE2Q9NQ36 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
SCUBE2Q9NQ36 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC23.77■■□□□ 1.4
SCUBE2Q9NQ36 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC23.77■■□□□ 1.4
SCUBE2Q9NQ36 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC23.77■■□□□ 1.4
SCUBE2Q9NQ36 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
SCUBE2Q9NQ36 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC23.77■■□□□ 1.4
SCUBE2Q9NQ36 AC103724.3-201ENST00000564481 992 ntBASIC23.76■■□□□ 1.39
SCUBE2Q9NQ36 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SCUBE2Q9NQ36 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SCUBE2Q9NQ36 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SCUBE2Q9NQ36 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC23.76■■□□□ 1.39
SCUBE2Q9NQ36 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SCUBE2Q9NQ36 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SCUBE2Q9NQ36 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SCUBE2Q9NQ36 AC120024.1-201ENST00000562672 995 ntBASIC23.75■■□□□ 1.39
SCUBE2Q9NQ36 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC23.75■■□□□ 1.39
SCUBE2Q9NQ36 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC23.75■■□□□ 1.39
SCUBE2Q9NQ36 AC142381.3-201ENST00000568208 1670 ntBASIC23.75■■□□□ 1.39
SCUBE2Q9NQ36 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SCUBE2Q9NQ36 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
SCUBE2Q9NQ36 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
SCUBE2Q9NQ36 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SCUBE2Q9NQ36 AC090877.2-201ENST00000558441 1738 ntBASIC23.74■■□□□ 1.39
SCUBE2Q9NQ36 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SCUBE2Q9NQ36 AC011551.1-201ENST00000614101 683 ntBASIC23.74■■□□□ 1.39
SCUBE2Q9NQ36 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
SCUBE2Q9NQ36 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
SCUBE2Q9NQ36 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
SCUBE2Q9NQ36 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
SCUBE2Q9NQ36 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC23.73■■□□□ 1.39
SCUBE2Q9NQ36 KRT18P24-201ENST00000344739 1156 ntBASIC23.73■■□□□ 1.39
SCUBE2Q9NQ36 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC23.73■■□□□ 1.39
SCUBE2Q9NQ36 MIR6089-201ENST00000616698 64 ntBASIC23.73■■□□□ 1.39
SCUBE2Q9NQ36 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
SCUBE2Q9NQ36 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
SCUBE2Q9NQ36 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC23.73■■□□□ 1.39
SCUBE2Q9NQ36 LSM7-203ENST00000585409 512 ntTSL 2 BASIC23.72■■□□□ 1.39
SCUBE2Q9NQ36 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC23.72■■□□□ 1.39
SCUBE2Q9NQ36 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC23.72■■□□□ 1.39
SCUBE2Q9NQ36 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SCUBE2Q9NQ36 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SCUBE2Q9NQ36 MED17-227ENST00000640521 2047 ntTSL 5 BASIC23.71■■□□□ 1.39
SCUBE2Q9NQ36 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC23.71■■□□□ 1.39
SCUBE2Q9NQ36 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
SCUBE2Q9NQ36 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC23.71■■□□□ 1.39
SCUBE2Q9NQ36 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC23.71■■□□□ 1.39
SCUBE2Q9NQ36 AL031848.2-201ENST00000607670 837 ntBASIC23.71■■□□□ 1.39
SCUBE2Q9NQ36 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
SCUBE2Q9NQ36 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
SCUBE2Q9NQ36 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
SCUBE2Q9NQ36 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
SCUBE2Q9NQ36 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
SCUBE2Q9NQ36 AC138932.3-201ENST00000567634 1902 ntBASIC23.7■■□□□ 1.38
SCUBE2Q9NQ36 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
SCUBE2Q9NQ36 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC23.7■■□□□ 1.38
SCUBE2Q9NQ36 LSR-205ENST00000427250 1606 ntTSL 2 BASIC23.7■■□□□ 1.38
SCUBE2Q9NQ36 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC23.7■■□□□ 1.38
SCUBE2Q9NQ36 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC23.69■■□□□ 1.38
SCUBE2Q9NQ36 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SCUBE2Q9NQ36 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
SCUBE2Q9NQ36 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SCUBE2Q9NQ36 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
SCUBE2Q9NQ36 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SCUBE2Q9NQ36 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
SCUBE2Q9NQ36 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SCUBE2Q9NQ36 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
SCUBE2Q9NQ36 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SCUBE2Q9NQ36 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
SCUBE2Q9NQ36 GAK-223ENST00000628912 497 ntTSL 5 BASIC23.68■■□□□ 1.38
SCUBE2Q9NQ36 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SCUBE2Q9NQ36 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SCUBE2Q9NQ36 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC23.68■■□□□ 1.38
SCUBE2Q9NQ36 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SCUBE2Q9NQ36 AC008406.3-201ENST00000620001 1374 ntBASIC23.67■■□□□ 1.38
SCUBE2Q9NQ36 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SCUBE2Q9NQ36 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SCUBE2Q9NQ36 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SCUBE2Q9NQ36 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
SCUBE2Q9NQ36 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC23.67■■□□□ 1.38
SCUBE2Q9NQ36 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SCUBE2Q9NQ36 AP003733.4-201ENST00000623785 1697 ntBASIC23.67■■□□□ 1.38
SCUBE2Q9NQ36 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
SCUBE2Q9NQ36 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC23.66■■□□□ 1.38
SCUBE2Q9NQ36 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms