Protein–RNA interactions for Protein: Q9N2K0

HERV-H_2q24.3 provirus ancestral Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9N2K0 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Q9N2K0 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC19.51■□□□□ 0.71
Q9N2K0 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.51■□□□□ 0.71
Q9N2K0 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Q9N2K0 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Q9N2K0 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Q9N2K0 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Q9N2K0 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Q9N2K0 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Q9N2K0 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Q9N2K0 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Q9N2K0 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Q9N2K0 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Q9N2K0 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Q9N2K0 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Q9N2K0 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Q9N2K0 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.49■□□□□ 0.71
Q9N2K0 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC19.49■□□□□ 0.71
Q9N2K0 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.49■□□□□ 0.71
Q9N2K0 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC19.49■□□□□ 0.71
Q9N2K0 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Q9N2K0 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Q9N2K0 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.48■□□□□ 0.71
Q9N2K0 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Q9N2K0 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Q9N2K0 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Q9N2K0 ABCB10P4-201ENST00000566803 2184 ntBASIC19.48■□□□□ 0.71
Q9N2K0 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC19.48■□□□□ 0.71
Q9N2K0 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Q9N2K0 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Q9N2K0 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Q9N2K0 GPX1-201ENST00000419349 1106 ntBASIC19.47■□□□□ 0.71
Q9N2K0 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Q9N2K0 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.47■□□□□ 0.71
Q9N2K0 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Q9N2K0 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Q9N2K0 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
Q9N2K0 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Q9N2K0 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Q9N2K0 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Q9N2K0 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Q9N2K0 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Q9N2K0 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Q9N2K0 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC19.46■□□□□ 0.71
Q9N2K0 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC19.46■□□□□ 0.71
Q9N2K0 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Q9N2K0 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.46■□□□□ 0.71
Q9N2K0 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Q9N2K0 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Q9N2K0 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Q9N2K0 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Q9N2K0 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Q9N2K0 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Q9N2K0 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Q9N2K0 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Q9N2K0 MIR4449-201ENST00000578365 66 ntBASIC19.45■□□□□ 0.7
Q9N2K0 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Q9N2K0 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.45■□□□□ 0.7
Q9N2K0 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Q9N2K0 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Q9N2K0 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.45■□□□□ 0.7
Q9N2K0 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Q9N2K0 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Q9N2K0 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC19.44■□□□□ 0.7
Q9N2K0 HES4-204ENST00000484667 667 ntTSL 3 BASIC19.44■□□□□ 0.7
Q9N2K0 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Q9N2K0 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Q9N2K0 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Q9N2K0 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Q9N2K0 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Q9N2K0 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Q9N2K0 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Q9N2K0 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Q9N2K0 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Q9N2K0 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
Q9N2K0 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Q9N2K0 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Q9N2K0 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.42■□□□□ 0.7
Q9N2K0 DUSP8P5-201ENST00000422884 1815 ntBASIC19.42■□□□□ 0.7
Q9N2K0 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.42■□□□□ 0.7
Q9N2K0 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Q9N2K0 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Q9N2K0 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Q9N2K0 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Q9N2K0 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC19.42■□□□□ 0.7
Q9N2K0 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Q9N2K0 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Q9N2K0 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Q9N2K0 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Q9N2K0 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Q9N2K0 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.41■□□□□ 0.7
Q9N2K0 AC012676.1-201ENST00000574705 1949 ntBASIC19.41■□□□□ 0.7
Q9N2K0 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Q9N2K0 AC133561.1-201ENST00000568600 2415 ntBASIC19.41■□□□□ 0.7
Q9N2K0 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Q9N2K0 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Q9N2K0 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
Q9N2K0 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Q9N2K0 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC19.41■□□□□ 0.7
Q9N2K0 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms