Protein–RNA interactions for Protein: Q9HCI7

MSL2, E3 ubiquitin-protein ligase MSL2, humanhuman

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSL2Q9HCI7 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20■□□□□ 0.79
MSL2Q9HCI7 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MSL2Q9HCI7 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MSL2Q9HCI7 KRT18P24-201ENST00000344739 1156 ntBASIC20■□□□□ 0.79
MSL2Q9HCI7 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
MSL2Q9HCI7 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20■□□□□ 0.79
MSL2Q9HCI7 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MSL2Q9HCI7 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20■□□□□ 0.79
MSL2Q9HCI7 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
MSL2Q9HCI7 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
MSL2Q9HCI7 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
MSL2Q9HCI7 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MSL2Q9HCI7 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
MSL2Q9HCI7 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MSL2Q9HCI7 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MSL2Q9HCI7 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
MSL2Q9HCI7 AC090877.2-201ENST00000558441 1738 ntBASIC19.99■□□□□ 0.79
MSL2Q9HCI7 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
MSL2Q9HCI7 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
MSL2Q9HCI7 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
MSL2Q9HCI7 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.98■□□□□ 0.79
MSL2Q9HCI7 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.98■□□□□ 0.79
MSL2Q9HCI7 AL451085.2-201ENST00000605085 799 ntBASIC19.98■□□□□ 0.79
MSL2Q9HCI7 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.98■□□□□ 0.79
MSL2Q9HCI7 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
MSL2Q9HCI7 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
MSL2Q9HCI7 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MSL2Q9HCI7 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MSL2Q9HCI7 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MSL2Q9HCI7 AC011551.1-201ENST00000614101 683 ntBASIC19.97■□□□□ 0.79
MSL2Q9HCI7 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
MSL2Q9HCI7 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
MSL2Q9HCI7 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.97■□□□□ 0.79
MSL2Q9HCI7 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.97■□□□□ 0.79
MSL2Q9HCI7 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
MSL2Q9HCI7 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.96■□□□□ 0.79
MSL2Q9HCI7 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.96■□□□□ 0.79
MSL2Q9HCI7 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MSL2Q9HCI7 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MSL2Q9HCI7 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MSL2Q9HCI7 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.96■□□□□ 0.79
MSL2Q9HCI7 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
MSL2Q9HCI7 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.96■□□□□ 0.79
MSL2Q9HCI7 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.96■□□□□ 0.79
MSL2Q9HCI7 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
MSL2Q9HCI7 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
MSL2Q9HCI7 AC138932.3-201ENST00000567634 1902 ntBASIC19.96■□□□□ 0.79
MSL2Q9HCI7 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
MSL2Q9HCI7 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MSL2Q9HCI7 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.95■□□□□ 0.78
MSL2Q9HCI7 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
MSL2Q9HCI7 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.95■□□□□ 0.78
MSL2Q9HCI7 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.95■□□□□ 0.78
MSL2Q9HCI7 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MSL2Q9HCI7 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
MSL2Q9HCI7 AC142381.3-201ENST00000568208 1670 ntBASIC19.94■□□□□ 0.78
MSL2Q9HCI7 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MSL2Q9HCI7 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
MSL2Q9HCI7 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
MSL2Q9HCI7 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MSL2Q9HCI7 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MSL2Q9HCI7 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
MSL2Q9HCI7 MIR6089-201ENST00000616698 64 ntBASIC19.93■□□□□ 0.78
MSL2Q9HCI7 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.93■□□□□ 0.78
MSL2Q9HCI7 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
MSL2Q9HCI7 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.93■□□□□ 0.78
MSL2Q9HCI7 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
MSL2Q9HCI7 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.93■□□□□ 0.78
MSL2Q9HCI7 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
MSL2Q9HCI7 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
MSL2Q9HCI7 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
MSL2Q9HCI7 AC009299.2-201ENST00000482477 511 ntBASIC19.92■□□□□ 0.78
MSL2Q9HCI7 MIR4281-201ENST00000580852 62 ntBASIC19.92■□□□□ 0.78
MSL2Q9HCI7 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
MSL2Q9HCI7 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC19.92■□□□□ 0.78
MSL2Q9HCI7 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.92■□□□□ 0.78
MSL2Q9HCI7 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
MSL2Q9HCI7 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MSL2Q9HCI7 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.91■□□□□ 0.78
MSL2Q9HCI7 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.91■□□□□ 0.78
MSL2Q9HCI7 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MSL2Q9HCI7 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
MSL2Q9HCI7 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.91■□□□□ 0.78
MSL2Q9HCI7 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
MSL2Q9HCI7 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.91■□□□□ 0.78
MSL2Q9HCI7 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.91■□□□□ 0.78
MSL2Q9HCI7 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MSL2Q9HCI7 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MSL2Q9HCI7 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
MSL2Q9HCI7 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MSL2Q9HCI7 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.9■□□□□ 0.78
MSL2Q9HCI7 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.9■□□□□ 0.78
MSL2Q9HCI7 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.9■□□□□ 0.78
MSL2Q9HCI7 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MSL2Q9HCI7 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MSL2Q9HCI7 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
MSL2Q9HCI7 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
MSL2Q9HCI7 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
MSL2Q9HCI7 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC19.9■□□□□ 0.78
MSL2Q9HCI7 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms