Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
BRF2Q9HAW0 HYI-210ENST00000486909 905 ntTSL 5 BASIC22.35■■□□□ 1.17
BRF2Q9HAW0 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC22.35■■□□□ 1.17
BRF2Q9HAW0 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
BRF2Q9HAW0 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
BRF2Q9HAW0 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
BRF2Q9HAW0 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC22.34■■□□□ 1.17
BRF2Q9HAW0 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
BRF2Q9HAW0 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
BRF2Q9HAW0 AC090877.2-201ENST00000558441 1738 ntBASIC22.34■■□□□ 1.17
BRF2Q9HAW0 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
BRF2Q9HAW0 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
BRF2Q9HAW0 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
BRF2Q9HAW0 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC22.33■■□□□ 1.17
BRF2Q9HAW0 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
BRF2Q9HAW0 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC22.33■■□□□ 1.17
BRF2Q9HAW0 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.16
BRF2Q9HAW0 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
BRF2Q9HAW0 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
BRF2Q9HAW0 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC22.32■■□□□ 1.16
BRF2Q9HAW0 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC22.32■■□□□ 1.16
BRF2Q9HAW0 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
BRF2Q9HAW0 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
BRF2Q9HAW0 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
BRF2Q9HAW0 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
BRF2Q9HAW0 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
BRF2Q9HAW0 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
BRF2Q9HAW0 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
BRF2Q9HAW0 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
BRF2Q9HAW0 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC22.3■■□□□ 1.16
BRF2Q9HAW0 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
BRF2Q9HAW0 AC019171.1-201ENST00000601251 1056 ntBASIC22.3■■□□□ 1.16
BRF2Q9HAW0 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC22.3■■□□□ 1.16
BRF2Q9HAW0 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC22.3■■□□□ 1.16
BRF2Q9HAW0 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
BRF2Q9HAW0 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC22.3■■□□□ 1.16
BRF2Q9HAW0 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
BRF2Q9HAW0 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC22.29■■□□□ 1.16
BRF2Q9HAW0 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
BRF2Q9HAW0 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC22.29■■□□□ 1.16
BRF2Q9HAW0 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
BRF2Q9HAW0 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
BRF2Q9HAW0 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
BRF2Q9HAW0 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC22.29■■□□□ 1.16
BRF2Q9HAW0 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
BRF2Q9HAW0 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC22.28■■□□□ 1.16
BRF2Q9HAW0 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
BRF2Q9HAW0 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
BRF2Q9HAW0 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC22.28■■□□□ 1.16
BRF2Q9HAW0 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
BRF2Q9HAW0 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
BRF2Q9HAW0 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
BRF2Q9HAW0 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
BRF2Q9HAW0 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC22.28■■□□□ 1.16
BRF2Q9HAW0 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
BRF2Q9HAW0 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
BRF2Q9HAW0 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC22.27■■□□□ 1.16
BRF2Q9HAW0 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
BRF2Q9HAW0 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC22.27■■□□□ 1.16
BRF2Q9HAW0 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
BRF2Q9HAW0 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
BRF2Q9HAW0 AC004812.2-201ENST00000611079 2094 ntBASIC22.27■■□□□ 1.16
BRF2Q9HAW0 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
BRF2Q9HAW0 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
BRF2Q9HAW0 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC22.26■■□□□ 1.15
BRF2Q9HAW0 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC22.26■■□□□ 1.15
BRF2Q9HAW0 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
BRF2Q9HAW0 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
BRF2Q9HAW0 MTX2-204ENST00000443241 799 ntTSL 3 BASIC22.26■■□□□ 1.15
BRF2Q9HAW0 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
BRF2Q9HAW0 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
BRF2Q9HAW0 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
BRF2Q9HAW0 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
BRF2Q9HAW0 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
BRF2Q9HAW0 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
BRF2Q9HAW0 AC139795.1-202ENST00000500444 432 ntBASIC22.25■■□□□ 1.15
BRF2Q9HAW0 AC022616.5-201ENST00000518796 181 ntBASIC22.25■■□□□ 1.15
BRF2Q9HAW0 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC22.25■■□□□ 1.15
BRF2Q9HAW0 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
BRF2Q9HAW0 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC22.25■■□□□ 1.15
BRF2Q9HAW0 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
BRF2Q9HAW0 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC22.25■■□□□ 1.15
BRF2Q9HAW0 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
BRF2Q9HAW0 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
BRF2Q9HAW0 SHD-204ENST00000599689 1729 ntTSL 5 BASIC22.24■■□□□ 1.15
BRF2Q9HAW0 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC22.24■■□□□ 1.15
BRF2Q9HAW0 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC22.24■■□□□ 1.15
BRF2Q9HAW0 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
BRF2Q9HAW0 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
BRF2Q9HAW0 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC22.23■■□□□ 1.15
BRF2Q9HAW0 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
BRF2Q9HAW0 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
BRF2Q9HAW0 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
BRF2Q9HAW0 DUX4L18-201ENST00000553347 1267 ntBASIC22.23■■□□□ 1.15
BRF2Q9HAW0 AC011551.1-201ENST00000614101 683 ntBASIC22.23■■□□□ 1.15
BRF2Q9HAW0 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
BRF2Q9HAW0 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
BRF2Q9HAW0 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC22.23■■□□□ 1.15
BRF2Q9HAW0 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
BRF2Q9HAW0 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms