Protein–RNA interactions for Protein: Q9HAH1

ZNF556, Zinc finger protein 556, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF556Q9HAH1 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ZNF556Q9HAH1 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.51■■□□□ 1.03
ZNF556Q9HAH1 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.51■■□□□ 1.03
ZNF556Q9HAH1 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ZNF556Q9HAH1 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
ZNF556Q9HAH1 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
ZNF556Q9HAH1 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
ZNF556Q9HAH1 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
ZNF556Q9HAH1 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ZNF556Q9HAH1 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ZNF556Q9HAH1 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.5■■□□□ 1.03
ZNF556Q9HAH1 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
ZNF556Q9HAH1 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ZNF556Q9HAH1 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
ZNF556Q9HAH1 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ZNF556Q9HAH1 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
ZNF556Q9HAH1 MLEC-202ENST00000412616 841 ntTSL 3 BASIC21.49■■□□□ 1.03
ZNF556Q9HAH1 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.49■■□□□ 1.03
ZNF556Q9HAH1 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
ZNF556Q9HAH1 ABCB10P4-201ENST00000566803 2184 ntBASIC21.48■■□□□ 1.03
ZNF556Q9HAH1 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
ZNF556Q9HAH1 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ZNF556Q9HAH1 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.48■■□□□ 1.03
ZNF556Q9HAH1 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ZNF556Q9HAH1 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC21.48■■□□□ 1.03
ZNF556Q9HAH1 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.48■■□□□ 1.03
ZNF556Q9HAH1 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.48■■□□□ 1.03
ZNF556Q9HAH1 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
ZNF556Q9HAH1 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ZNF556Q9HAH1 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ZNF556Q9HAH1 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ZNF556Q9HAH1 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ZNF556Q9HAH1 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.48■■□□□ 1.03
ZNF556Q9HAH1 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ZNF556Q9HAH1 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.47■■□□□ 1.03
ZNF556Q9HAH1 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ZNF556Q9HAH1 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
ZNF556Q9HAH1 ZNRF2P2-203ENST00000454624 420 ntBASIC21.47■■□□□ 1.03
ZNF556Q9HAH1 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
ZNF556Q9HAH1 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.46■■□□□ 1.03
ZNF556Q9HAH1 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ZNF556Q9HAH1 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ZNF556Q9HAH1 RPS2P35-201ENST00000443417 897 ntBASIC21.46■■□□□ 1.03
ZNF556Q9HAH1 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ZNF556Q9HAH1 MIR3960-201ENST00000583311 91 ntBASIC21.46■■□□□ 1.03
ZNF556Q9HAH1 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
ZNF556Q9HAH1 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.46■■□□□ 1.03
ZNF556Q9HAH1 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.46■■□□□ 1.03
ZNF556Q9HAH1 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.46■■□□□ 1.03
ZNF556Q9HAH1 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ZNF556Q9HAH1 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ZNF556Q9HAH1 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
ZNF556Q9HAH1 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ZNF556Q9HAH1 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ZNF556Q9HAH1 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.45■■□□□ 1.02
ZNF556Q9HAH1 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
ZNF556Q9HAH1 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
ZNF556Q9HAH1 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.45■■□□□ 1.02
ZNF556Q9HAH1 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ZNF556Q9HAH1 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
ZNF556Q9HAH1 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
ZNF556Q9HAH1 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.44■■□□□ 1.02
ZNF556Q9HAH1 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ZNF556Q9HAH1 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ZNF556Q9HAH1 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.44■■□□□ 1.02
ZNF556Q9HAH1 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ZNF556Q9HAH1 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ZNF556Q9HAH1 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.43■■□□□ 1.02
ZNF556Q9HAH1 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ZNF556Q9HAH1 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
ZNF556Q9HAH1 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
ZNF556Q9HAH1 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
ZNF556Q9HAH1 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ZNF556Q9HAH1 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
ZNF556Q9HAH1 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
ZNF556Q9HAH1 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
ZNF556Q9HAH1 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ZNF556Q9HAH1 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC21.42■■□□□ 1.02
ZNF556Q9HAH1 CR559946.2-201ENST00000623684 991 ntBASIC21.42■■□□□ 1.02
ZNF556Q9HAH1 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ZNF556Q9HAH1 AC079834.2-201ENST00000609776 1949 ntBASIC21.41■■□□□ 1.02
ZNF556Q9HAH1 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
ZNF556Q9HAH1 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
ZNF556Q9HAH1 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ZNF556Q9HAH1 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
ZNF556Q9HAH1 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
ZNF556Q9HAH1 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
ZNF556Q9HAH1 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
ZNF556Q9HAH1 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ZNF556Q9HAH1 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
ZNF556Q9HAH1 AC025884.2-201ENST00000553429 711 ntBASIC21.4■■□□□ 1.02
ZNF556Q9HAH1 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
ZNF556Q9HAH1 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
ZNF556Q9HAH1 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ZNF556Q9HAH1 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
ZNF556Q9HAH1 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
ZNF556Q9HAH1 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
ZNF556Q9HAH1 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
ZNF556Q9HAH1 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
ZNF556Q9HAH1 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms