Protein–RNA interactions for Protein: Q9H6A9

PCNX3, Pecanex-like protein 3, humanhuman

Predictions only

Length 2,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3Q9H6A9 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PCNX3Q9H6A9 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
PCNX3Q9H6A9 KRT18P24-201ENST00000344739 1156 ntBASIC21.3■■□□□ 1
PCNX3Q9H6A9 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
PCNX3Q9H6A9 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PCNX3Q9H6A9 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.3■■□□□ 1
PCNX3Q9H6A9 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PCNX3Q9H6A9 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCNX3Q9H6A9 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.29■■□□□ 1
PCNX3Q9H6A9 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
PCNX3Q9H6A9 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.29■■□□□ 1
PCNX3Q9H6A9 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.29■■□□□ 1
PCNX3Q9H6A9 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCNX3Q9H6A9 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCNX3Q9H6A9 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCNX3Q9H6A9 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.28■■□□□ 1
PCNX3Q9H6A9 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.27■■□□□ 1
PCNX3Q9H6A9 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.27■■□□□ 1
PCNX3Q9H6A9 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.27■□□□□ 0.99
PCNX3Q9H6A9 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
PCNX3Q9H6A9 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCNX3Q9H6A9 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
PCNX3Q9H6A9 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PCNX3Q9H6A9 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.26■□□□□ 0.99
PCNX3Q9H6A9 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.26■□□□□ 0.99
PCNX3Q9H6A9 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.26■□□□□ 0.99
PCNX3Q9H6A9 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.25■□□□□ 0.99
PCNX3Q9H6A9 AC120024.1-201ENST00000562672 995 ntBASIC21.25■□□□□ 0.99
PCNX3Q9H6A9 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.25■□□□□ 0.99
PCNX3Q9H6A9 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.25■□□□□ 0.99
PCNX3Q9H6A9 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCNX3Q9H6A9 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
PCNX3Q9H6A9 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.24■□□□□ 0.99
PCNX3Q9H6A9 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
PCNX3Q9H6A9 THA1P-201ENST00000590384 1145 ntBASIC21.24■□□□□ 0.99
PCNX3Q9H6A9 AF131216.4-201ENST00000638924 1588 ntBASIC21.24■□□□□ 0.99
PCNX3Q9H6A9 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCNX3Q9H6A9 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PCNX3Q9H6A9 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
PCNX3Q9H6A9 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.24■□□□□ 0.99
PCNX3Q9H6A9 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PCNX3Q9H6A9 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
PCNX3Q9H6A9 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.23■□□□□ 0.99
PCNX3Q9H6A9 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PCNX3Q9H6A9 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PCNX3Q9H6A9 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCNX3Q9H6A9 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.23■□□□□ 0.99
PCNX3Q9H6A9 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
PCNX3Q9H6A9 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCNX3Q9H6A9 YBX1P4-201ENST00000392794 808 ntBASIC21.22■□□□□ 0.99
PCNX3Q9H6A9 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PCNX3Q9H6A9 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCNX3Q9H6A9 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PCNX3Q9H6A9 AC011551.1-201ENST00000614101 683 ntBASIC21.22■□□□□ 0.99
PCNX3Q9H6A9 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.22■□□□□ 0.99
PCNX3Q9H6A9 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCNX3Q9H6A9 AC135731.1-201ENST00000569415 2548 ntBASIC21.22■□□□□ 0.99
PCNX3Q9H6A9 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.22■□□□□ 0.99
PCNX3Q9H6A9 MIR6089-201ENST00000616698 64 ntBASIC21.22■□□□□ 0.99
PCNX3Q9H6A9 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCNX3Q9H6A9 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCNX3Q9H6A9 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PCNX3Q9H6A9 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCNX3Q9H6A9 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.98
PCNX3Q9H6A9 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.2■□□□□ 0.98
PCNX3Q9H6A9 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCNX3Q9H6A9 AP003733.4-201ENST00000623785 1697 ntBASIC21.2■□□□□ 0.98
PCNX3Q9H6A9 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.2■□□□□ 0.98
PCNX3Q9H6A9 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PCNX3Q9H6A9 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PCNX3Q9H6A9 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.2■□□□□ 0.98
PCNX3Q9H6A9 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PCNX3Q9H6A9 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.2■□□□□ 0.98
PCNX3Q9H6A9 AC090877.2-201ENST00000558441 1738 ntBASIC21.2■□□□□ 0.98
PCNX3Q9H6A9 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
PCNX3Q9H6A9 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCNX3Q9H6A9 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
PCNX3Q9H6A9 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.19■□□□□ 0.98
PCNX3Q9H6A9 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PCNX3Q9H6A9 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCNX3Q9H6A9 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCNX3Q9H6A9 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.19■□□□□ 0.98
PCNX3Q9H6A9 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
PCNX3Q9H6A9 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.19■□□□□ 0.98
PCNX3Q9H6A9 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.19■□□□□ 0.98
PCNX3Q9H6A9 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PCNX3Q9H6A9 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.18■□□□□ 0.98
PCNX3Q9H6A9 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PCNX3Q9H6A9 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCNX3Q9H6A9 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PCNX3Q9H6A9 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
PCNX3Q9H6A9 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
PCNX3Q9H6A9 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
PCNX3Q9H6A9 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
PCNX3Q9H6A9 AC142381.3-201ENST00000568208 1670 ntBASIC21.17■□□□□ 0.98
PCNX3Q9H6A9 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
PCNX3Q9H6A9 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.17■□□□□ 0.98
PCNX3Q9H6A9 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PCNX3Q9H6A9 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PCNX3Q9H6A9 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms