Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
HDHD3Q9BSH5 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HDHD3Q9BSH5 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HDHD3Q9BSH5 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HDHD3Q9BSH5 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HDHD3Q9BSH5 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HDHD3Q9BSH5 CEP120-209ENST00000515110 606 ntTSL 3 BASIC19.67■□□□□ 0.74
HDHD3Q9BSH5 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC19.67■□□□□ 0.74
HDHD3Q9BSH5 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HDHD3Q9BSH5 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
HDHD3Q9BSH5 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
HDHD3Q9BSH5 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HDHD3Q9BSH5 AC068473.5-201ENST00000616428 2072 ntBASIC19.66■□□□□ 0.74
HDHD3Q9BSH5 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HDHD3Q9BSH5 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.66■□□□□ 0.74
HDHD3Q9BSH5 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
HDHD3Q9BSH5 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC19.66■□□□□ 0.74
HDHD3Q9BSH5 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HDHD3Q9BSH5 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.66■□□□□ 0.74
HDHD3Q9BSH5 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HDHD3Q9BSH5 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HDHD3Q9BSH5 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HDHD3Q9BSH5 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HDHD3Q9BSH5 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HDHD3Q9BSH5 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.66■□□□□ 0.74
HDHD3Q9BSH5 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
HDHD3Q9BSH5 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.65■□□□□ 0.74
HDHD3Q9BSH5 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HDHD3Q9BSH5 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HDHD3Q9BSH5 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC19.65■□□□□ 0.74
HDHD3Q9BSH5 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HDHD3Q9BSH5 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HDHD3Q9BSH5 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC19.65■□□□□ 0.74
HDHD3Q9BSH5 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.65■□□□□ 0.74
HDHD3Q9BSH5 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HDHD3Q9BSH5 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.64■□□□□ 0.74
HDHD3Q9BSH5 AC007029.1-201ENST00000604183 313 ntBASIC19.64■□□□□ 0.73
HDHD3Q9BSH5 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.64■□□□□ 0.73
HDHD3Q9BSH5 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.64■□□□□ 0.73
HDHD3Q9BSH5 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
HDHD3Q9BSH5 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HDHD3Q9BSH5 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
HDHD3Q9BSH5 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC19.63■□□□□ 0.73
HDHD3Q9BSH5 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
HDHD3Q9BSH5 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
HDHD3Q9BSH5 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HDHD3Q9BSH5 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HDHD3Q9BSH5 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
HDHD3Q9BSH5 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
HDHD3Q9BSH5 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
HDHD3Q9BSH5 FOXO3B-201ENST00000395675 1928 ntBASIC19.62■□□□□ 0.73
HDHD3Q9BSH5 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HDHD3Q9BSH5 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
HDHD3Q9BSH5 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HDHD3Q9BSH5 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
HDHD3Q9BSH5 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.61■□□□□ 0.73
HDHD3Q9BSH5 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
HDHD3Q9BSH5 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
HDHD3Q9BSH5 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
HDHD3Q9BSH5 DUSP8P5-201ENST00000422884 1815 ntBASIC19.61■□□□□ 0.73
HDHD3Q9BSH5 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HDHD3Q9BSH5 RAP2CP1-202ENST00000605179 643 ntBASIC19.61■□□□□ 0.73
HDHD3Q9BSH5 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HDHD3Q9BSH5 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HDHD3Q9BSH5 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HDHD3Q9BSH5 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.6■□□□□ 0.73
HDHD3Q9BSH5 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
HDHD3Q9BSH5 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HDHD3Q9BSH5 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC19.6■□□□□ 0.73
HDHD3Q9BSH5 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
HDHD3Q9BSH5 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HDHD3Q9BSH5 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HDHD3Q9BSH5 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HDHD3Q9BSH5 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
HDHD3Q9BSH5 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HDHD3Q9BSH5 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HDHD3Q9BSH5 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.59■□□□□ 0.73
HDHD3Q9BSH5 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.59■□□□□ 0.73
HDHD3Q9BSH5 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HDHD3Q9BSH5 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC19.59■□□□□ 0.73
HDHD3Q9BSH5 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
HDHD3Q9BSH5 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
HDHD3Q9BSH5 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HDHD3Q9BSH5 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HDHD3Q9BSH5 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.58■□□□□ 0.73
HDHD3Q9BSH5 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HDHD3Q9BSH5 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
HDHD3Q9BSH5 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HDHD3Q9BSH5 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
HDHD3Q9BSH5 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
HDHD3Q9BSH5 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
HDHD3Q9BSH5 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
HDHD3Q9BSH5 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC19.58■□□□□ 0.72
HDHD3Q9BSH5 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.58■□□□□ 0.72
HDHD3Q9BSH5 AC012676.1-201ENST00000574705 1949 ntBASIC19.58■□□□□ 0.72
HDHD3Q9BSH5 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HDHD3Q9BSH5 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.57■□□□□ 0.72
HDHD3Q9BSH5 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HDHD3Q9BSH5 C9orf163-202ENST00000624034 2573 ntBASIC19.57■□□□□ 0.72
HDHD3Q9BSH5 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms