Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.67■□□□□ 0.9
APH1AQ96BI3 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
APH1AQ96BI3 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
APH1AQ96BI3 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
APH1AQ96BI3 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.67■□□□□ 0.9
APH1AQ96BI3 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.67■□□□□ 0.9
APH1AQ96BI3 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
APH1AQ96BI3 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
APH1AQ96BI3 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
APH1AQ96BI3 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
APH1AQ96BI3 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.67■□□□□ 0.9
APH1AQ96BI3 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
APH1AQ96BI3 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
APH1AQ96BI3 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
APH1AQ96BI3 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.66■□□□□ 0.9
APH1AQ96BI3 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
APH1AQ96BI3 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
APH1AQ96BI3 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
APH1AQ96BI3 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.66■□□□□ 0.9
APH1AQ96BI3 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
APH1AQ96BI3 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
APH1AQ96BI3 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
APH1AQ96BI3 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
APH1AQ96BI3 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.66■□□□□ 0.9
APH1AQ96BI3 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.66■□□□□ 0.9
APH1AQ96BI3 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
APH1AQ96BI3 AC022211.4-201ENST00000625094 2161 ntBASIC20.66■□□□□ 0.9
APH1AQ96BI3 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
APH1AQ96BI3 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.65■□□□□ 0.9
APH1AQ96BI3 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
APH1AQ96BI3 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
APH1AQ96BI3 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.65■□□□□ 0.9
APH1AQ96BI3 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
APH1AQ96BI3 Z92544.1-202ENST00000571933 1220 ntBASIC20.65■□□□□ 0.9
APH1AQ96BI3 AC137630.3-201ENST00000607245 391 ntBASIC20.65■□□□□ 0.9
APH1AQ96BI3 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
APH1AQ96BI3 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
APH1AQ96BI3 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
APH1AQ96BI3 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
APH1AQ96BI3 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
APH1AQ96BI3 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.64■□□□□ 0.9
APH1AQ96BI3 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
APH1AQ96BI3 AC020928.2-201ENST00000588717 2197 ntBASIC20.64■□□□□ 0.89
APH1AQ96BI3 KRT125P-201ENST00000546827 989 ntBASIC20.64■□□□□ 0.89
APH1AQ96BI3 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.64■□□□□ 0.89
APH1AQ96BI3 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.64■□□□□ 0.89
APH1AQ96BI3 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
APH1AQ96BI3 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
APH1AQ96BI3 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
APH1AQ96BI3 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
APH1AQ96BI3 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
APH1AQ96BI3 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
APH1AQ96BI3 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.63■□□□□ 0.89
APH1AQ96BI3 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
APH1AQ96BI3 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
APH1AQ96BI3 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
APH1AQ96BI3 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
APH1AQ96BI3 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
APH1AQ96BI3 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.62■□□□□ 0.89
APH1AQ96BI3 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.62■□□□□ 0.89
APH1AQ96BI3 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.62■□□□□ 0.89
APH1AQ96BI3 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
APH1AQ96BI3 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.62■□□□□ 0.89
APH1AQ96BI3 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
APH1AQ96BI3 AC239859.2-201ENST00000444165 318 ntBASIC20.62■□□□□ 0.89
APH1AQ96BI3 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
APH1AQ96BI3 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
APH1AQ96BI3 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
APH1AQ96BI3 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.61■□□□□ 0.89
APH1AQ96BI3 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.61■□□□□ 0.89
APH1AQ96BI3 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
APH1AQ96BI3 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
APH1AQ96BI3 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
APH1AQ96BI3 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
APH1AQ96BI3 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
APH1AQ96BI3 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.6■□□□□ 0.89
APH1AQ96BI3 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.6■□□□□ 0.89
APH1AQ96BI3 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
APH1AQ96BI3 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.6■□□□□ 0.89
APH1AQ96BI3 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.6■□□□□ 0.89
APH1AQ96BI3 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.6■□□□□ 0.89
APH1AQ96BI3 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
APH1AQ96BI3 AC142381.3-201ENST00000568208 1670 ntBASIC20.6■□□□□ 0.89
APH1AQ96BI3 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
APH1AQ96BI3 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
APH1AQ96BI3 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
APH1AQ96BI3 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
APH1AQ96BI3 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
APH1AQ96BI3 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
APH1AQ96BI3 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
APH1AQ96BI3 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
APH1AQ96BI3 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
APH1AQ96BI3 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.59■□□□□ 0.89
APH1AQ96BI3 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
APH1AQ96BI3 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
APH1AQ96BI3 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
APH1AQ96BI3 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.58■□□□□ 0.89
APH1AQ96BI3 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
APH1AQ96BI3 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.58■□□□□ 0.89
APH1AQ96BI3 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms