Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.96■□□□□ 0.95
PTP4A1Q93096 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PTP4A1Q93096 ABCB10P4-201ENST00000566803 2184 ntBASIC20.96■□□□□ 0.95
PTP4A1Q93096 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PTP4A1Q93096 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PTP4A1Q93096 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.95■□□□□ 0.94
PTP4A1Q93096 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PTP4A1Q93096 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PTP4A1Q93096 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.95■□□□□ 0.94
PTP4A1Q93096 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.95■□□□□ 0.94
PTP4A1Q93096 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PTP4A1Q93096 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.94■□□□□ 0.94
PTP4A1Q93096 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PTP4A1Q93096 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.94■□□□□ 0.94
PTP4A1Q93096 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PTP4A1Q93096 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.94■□□□□ 0.94
PTP4A1Q93096 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.94■□□□□ 0.94
PTP4A1Q93096 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC20.94■□□□□ 0.94
PTP4A1Q93096 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.94■□□□□ 0.94
PTP4A1Q93096 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PTP4A1Q93096 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PTP4A1Q93096 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PTP4A1Q93096 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.93■□□□□ 0.94
PTP4A1Q93096 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
PTP4A1Q93096 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
PTP4A1Q93096 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PTP4A1Q93096 AC007029.1-201ENST00000604183 313 ntBASIC20.93■□□□□ 0.94
PTP4A1Q93096 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PTP4A1Q93096 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.93■□□□□ 0.94
PTP4A1Q93096 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PTP4A1Q93096 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
PTP4A1Q93096 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PTP4A1Q93096 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.92■□□□□ 0.94
PTP4A1Q93096 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.92■□□□□ 0.94
PTP4A1Q93096 RAP2CP1-202ENST00000605179 643 ntBASIC20.92■□□□□ 0.94
PTP4A1Q93096 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
PTP4A1Q93096 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTP4A1Q93096 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
PTP4A1Q93096 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.92■□□□□ 0.94
PTP4A1Q93096 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PTP4A1Q93096 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PTP4A1Q93096 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PTP4A1Q93096 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PTP4A1Q93096 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PTP4A1Q93096 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PTP4A1Q93096 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.91■□□□□ 0.94
PTP4A1Q93096 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
PTP4A1Q93096 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PTP4A1Q93096 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PTP4A1Q93096 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.91■□□□□ 0.94
PTP4A1Q93096 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
PTP4A1Q93096 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PTP4A1Q93096 FOXO3B-201ENST00000395675 1928 ntBASIC20.9■□□□□ 0.94
PTP4A1Q93096 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PTP4A1Q93096 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
PTP4A1Q93096 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.9■□□□□ 0.94
PTP4A1Q93096 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
PTP4A1Q93096 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.9■□□□□ 0.94
PTP4A1Q93096 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PTP4A1Q93096 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PTP4A1Q93096 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PTP4A1Q93096 AC068473.5-201ENST00000616428 2072 ntBASIC20.89■□□□□ 0.93
PTP4A1Q93096 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
PTP4A1Q93096 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.89■□□□□ 0.93
PTP4A1Q93096 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PTP4A1Q93096 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
PTP4A1Q93096 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PTP4A1Q93096 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
PTP4A1Q93096 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PTP4A1Q93096 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PTP4A1Q93096 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PTP4A1Q93096 AC012676.1-201ENST00000574705 1949 ntBASIC20.88■□□□□ 0.93
PTP4A1Q93096 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
PTP4A1Q93096 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.88■□□□□ 0.93
PTP4A1Q93096 RARRES2P2-201ENST00000394842 485 ntBASIC20.88■□□□□ 0.93
PTP4A1Q93096 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PTP4A1Q93096 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PTP4A1Q93096 AC026202.3-201ENST00000600805 1127 ntBASIC20.88■□□□□ 0.93
PTP4A1Q93096 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PTP4A1Q93096 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PTP4A1Q93096 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
PTP4A1Q93096 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.88■□□□□ 0.93
PTP4A1Q93096 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PTP4A1Q93096 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PTP4A1Q93096 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PTP4A1Q93096 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
PTP4A1Q93096 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PTP4A1Q93096 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PTP4A1Q93096 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.87■□□□□ 0.93
PTP4A1Q93096 DUSP8P5-201ENST00000422884 1815 ntBASIC20.87■□□□□ 0.93
PTP4A1Q93096 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PTP4A1Q93096 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PTP4A1Q93096 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
PTP4A1Q93096 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PTP4A1Q93096 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.86■□□□□ 0.93
PTP4A1Q93096 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.86■□□□□ 0.93
PTP4A1Q93096 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PTP4A1Q93096 KRT18P10-201ENST00000388836 1287 ntBASIC20.86■□□□□ 0.93
PTP4A1Q93096 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PTP4A1Q93096 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms