Protein–RNA interactions for Protein: Q92890

UFD1, Ubiquitin recognition factor in ER-associated degradation protein 1, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1Q92890 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
UFD1Q92890 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UFD1Q92890 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UFD1Q92890 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.75■□□□□ 0.91
UFD1Q92890 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.75■□□□□ 0.91
UFD1Q92890 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
UFD1Q92890 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
UFD1Q92890 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
UFD1Q92890 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
UFD1Q92890 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
UFD1Q92890 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
UFD1Q92890 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
UFD1Q92890 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
UFD1Q92890 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC20.74■□□□□ 0.91
UFD1Q92890 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
UFD1Q92890 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
UFD1Q92890 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
UFD1Q92890 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
UFD1Q92890 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
UFD1Q92890 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
UFD1Q92890 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
UFD1Q92890 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
UFD1Q92890 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
UFD1Q92890 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
UFD1Q92890 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC20.73■□□□□ 0.91
UFD1Q92890 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
UFD1Q92890 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.73■□□□□ 0.91
UFD1Q92890 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
UFD1Q92890 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.73■□□□□ 0.91
UFD1Q92890 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
UFD1Q92890 AL117328.2-201ENST00000624617 1940 ntBASIC20.72■□□□□ 0.91
UFD1Q92890 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
UFD1Q92890 AC126177.7-201ENST00000547904 679 ntBASIC20.72■□□□□ 0.91
UFD1Q92890 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
UFD1Q92890 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
UFD1Q92890 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.72■□□□□ 0.91
UFD1Q92890 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
UFD1Q92890 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
UFD1Q92890 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
UFD1Q92890 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
UFD1Q92890 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
UFD1Q92890 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
UFD1Q92890 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
UFD1Q92890 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
UFD1Q92890 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.71■□□□□ 0.91
UFD1Q92890 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
UFD1Q92890 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
UFD1Q92890 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
UFD1Q92890 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
UFD1Q92890 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
UFD1Q92890 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
UFD1Q92890 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
UFD1Q92890 HLA-V-202ENST00000446817 847 ntBASIC20.7■□□□□ 0.9
UFD1Q92890 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC20.7■□□□□ 0.9
UFD1Q92890 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
UFD1Q92890 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
UFD1Q92890 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
UFD1Q92890 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
UFD1Q92890 HLA-L-211ENST00000482052 1765 ntBASIC20.69■□□□□ 0.9
UFD1Q92890 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
UFD1Q92890 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
UFD1Q92890 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
UFD1Q92890 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
UFD1Q92890 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.69■□□□□ 0.9
UFD1Q92890 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
UFD1Q92890 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.69■□□□□ 0.9
UFD1Q92890 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
UFD1Q92890 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
UFD1Q92890 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.69■□□□□ 0.9
UFD1Q92890 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.69■□□□□ 0.9
UFD1Q92890 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.69■□□□□ 0.9
UFD1Q92890 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
UFD1Q92890 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
UFD1Q92890 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
UFD1Q92890 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UFD1Q92890 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.68■□□□□ 0.9
UFD1Q92890 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.68■□□□□ 0.9
UFD1Q92890 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UFD1Q92890 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
UFD1Q92890 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UFD1Q92890 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.68■□□□□ 0.9
UFD1Q92890 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
UFD1Q92890 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC20.68■□□□□ 0.9
UFD1Q92890 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC20.68■□□□□ 0.9
UFD1Q92890 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UFD1Q92890 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
UFD1Q92890 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.68■□□□□ 0.9
UFD1Q92890 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
UFD1Q92890 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
UFD1Q92890 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.67■□□□□ 0.9
UFD1Q92890 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UFD1Q92890 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UFD1Q92890 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
UFD1Q92890 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
UFD1Q92890 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
UFD1Q92890 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
UFD1Q92890 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
UFD1Q92890 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
UFD1Q92890 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.66■□□□□ 0.9
UFD1Q92890 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms