Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SMIM4Q8WVI0 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
SMIM4Q8WVI0 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SMIM4Q8WVI0 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.95■□□□□ 0.78
SMIM4Q8WVI0 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMIM4Q8WVI0 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMIM4Q8WVI0 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
SMIM4Q8WVI0 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMIM4Q8WVI0 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMIM4Q8WVI0 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
SMIM4Q8WVI0 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMIM4Q8WVI0 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
SMIM4Q8WVI0 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
SMIM4Q8WVI0 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMIM4Q8WVI0 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMIM4Q8WVI0 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMIM4Q8WVI0 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMIM4Q8WVI0 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMIM4Q8WVI0 AC148477.6-201ENST00000623746 465 ntBASIC19.93■□□□□ 0.78
SMIM4Q8WVI0 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMIM4Q8WVI0 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SMIM4Q8WVI0 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SMIM4Q8WVI0 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMIM4Q8WVI0 HLA-L-211ENST00000482052 1765 ntBASIC19.93■□□□□ 0.78
SMIM4Q8WVI0 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SMIM4Q8WVI0 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMIM4Q8WVI0 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SMIM4Q8WVI0 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SMIM4Q8WVI0 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMIM4Q8WVI0 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMIM4Q8WVI0 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMIM4Q8WVI0 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMIM4Q8WVI0 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.91■□□□□ 0.78
SMIM4Q8WVI0 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SMIM4Q8WVI0 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMIM4Q8WVI0 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SMIM4Q8WVI0 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMIM4Q8WVI0 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC19.91■□□□□ 0.78
SMIM4Q8WVI0 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMIM4Q8WVI0 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMIM4Q8WVI0 AC008813.1-201ENST00000536597 885 ntBASIC19.9■□□□□ 0.78
SMIM4Q8WVI0 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SMIM4Q8WVI0 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMIM4Q8WVI0 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SMIM4Q8WVI0 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SMIM4Q8WVI0 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMIM4Q8WVI0 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMIM4Q8WVI0 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
SMIM4Q8WVI0 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMIM4Q8WVI0 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMIM4Q8WVI0 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMIM4Q8WVI0 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMIM4Q8WVI0 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMIM4Q8WVI0 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SMIM4Q8WVI0 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SMIM4Q8WVI0 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMIM4Q8WVI0 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMIM4Q8WVI0 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
SMIM4Q8WVI0 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMIM4Q8WVI0 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SMIM4Q8WVI0 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMIM4Q8WVI0 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMIM4Q8WVI0 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC19.88■□□□□ 0.77
SMIM4Q8WVI0 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SMIM4Q8WVI0 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMIM4Q8WVI0 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
SMIM4Q8WVI0 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
SMIM4Q8WVI0 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SMIM4Q8WVI0 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
SMIM4Q8WVI0 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMIM4Q8WVI0 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.87■□□□□ 0.77
SMIM4Q8WVI0 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.87■□□□□ 0.77
SMIM4Q8WVI0 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMIM4Q8WVI0 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SMIM4Q8WVI0 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMIM4Q8WVI0 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SMIM4Q8WVI0 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMIM4Q8WVI0 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
SMIM4Q8WVI0 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
SMIM4Q8WVI0 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMIM4Q8WVI0 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMIM4Q8WVI0 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMIM4Q8WVI0 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SMIM4Q8WVI0 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SMIM4Q8WVI0 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SMIM4Q8WVI0 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.86■□□□□ 0.77
SMIM4Q8WVI0 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SMIM4Q8WVI0 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMIM4Q8WVI0 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMIM4Q8WVI0 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SMIM4Q8WVI0 AC087741.3-201ENST00000624270 1347 ntBASIC19.86■□□□□ 0.77
SMIM4Q8WVI0 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SMIM4Q8WVI0 AC021231.2-201ENST00000594613 730 ntBASIC19.86■□□□□ 0.77
SMIM4Q8WVI0 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMIM4Q8WVI0 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMIM4Q8WVI0 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
SMIM4Q8WVI0 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMIM4Q8WVI0 LINC00526-201ENST00000581067 1875 ntBASIC19.86■□□□□ 0.77
SMIM4Q8WVI0 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMIM4Q8WVI0 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms